Vibrio sp. D3: ACHFJ9_13120
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Entry
ACHFJ9_13120 CDS
T11387
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
vii Vibrio sp. D3
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vii03009
]
ACHFJ9_13120
Enzymes [BR:
vii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
ACHFJ9_13120
Ribosome biogenesis [BR:
vii03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACHFJ9_13120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
Motif
Other DBs
NCBI-ProteinID:
XJJ27802
LinkDB
All DBs
Position
2:complement(1091139..1091840)
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AA seq
233 aa
AA seq
DB search
MSSRTGQEKGRSRNQSKTGHFKHSGARNGSKTRTQQDRRPNRPTKSQKPKVAPKDRKVII
FNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLMVLTNDGILQAKLTQPKS
KSPKTYWVQVDGAPQEQDLEKLRKGVELKDGMTLPAEVEVIPEPQVWDRTPPVRFRANIP
TTWLAITIIEGRNRQVRRMTAHIGFPTLRLVRYSMGGIVLDDLKPGEWREIKL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcgtacaggtcaggaaaaaggtcgcagtcgtaaccagtctaaaacgggccat
tttaaacactcaggagctcgcaatggctcgaagactcgtactcagcaagaccgtcgccct
aatcgcccaacaaaaagccaaaagccaaaagtggcccccaaagatcgtaaagtcattatt
ttcaataagccttacgatacgctcagtcaatttaccgatggcgatggtcgcaaaacgtta
gcggactatatcccaatcaaagatgtctatgcggctggccgattggaccgagacagcgaa
ggtttgatggtactcactaacgatggcatcttgcaggcgaagctcacgcagccaaagtca
aaatcgccgaagacttattgggttcaagttgatggcgctcctcaggagcaagatcttgaa
aaattgagaaagggagtagagctaaaagatggtatgactctaccagccgaagttgaagtg
attccagaaccacaagtctgggatagaacccctcctgttcgttttcgggcaaatatccca
acaacgtggctagccattaccattattgagggaagaaatcgccaggtgcgtcgcatgact
gcacacattggcttcccaacgctgcgtttagttcgttactcgatgggcggcattgttctt
gacgatttaaagccaggggagtggcgagaaataaagctctag
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