Vibrio sp. D3: ACHFJ9_17175
Help
Entry
ACHFJ9_17175 CDS
T11387
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vii Vibrio sp. D3
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vii03032
]
ACHFJ9_17175 (gyrA)
03400 DNA repair and recombination proteins [BR:
vii03400
]
ACHFJ9_17175 (gyrA)
Enzymes [BR:
vii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACHFJ9_17175 (gyrA)
DNA replication proteins [BR:
vii03032
]
Prokaryotic type
DNA Topoisomerases
ACHFJ9_17175 (gyrA)
DNA repair and recombination proteins [BR:
vii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACHFJ9_17175 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6674
Motif
Other DBs
NCBI-ProteinID:
XJJ25828
LinkDB
All DBs
Position
2:complement(1979737..1982457)
Genome browser
AA seq
906 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKADIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIELIRKAPTPAEAKAGLIARGWDLGNVS
AMLERAGTDAARPEWLEPQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILGEYKTL
LEEIAELMHILASTERLMEVIREELEAVRDGFGDARRTEITAASHDIDMEELIAREDVVV
TLSHGGYVKYQVLSDYESQRRGGKGKSATKMKDEDHIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILRVDEFSEDKFIFMATGDGTVKKTPLN
QFANVRSNGLIAVNLREDDSLIGVDITNGENEIMLFSKAGKVVRFKEAEEIPVLDENGKP
VLDENGQPEIKFKGVRPMGRTASGVRGMKLAENDQVVSLIVPSHEGDILTVTENGYGKRT
ALSEYPTKGRGTQGVVSIKVSERNGPVVGAIQVVEGDEMMMITDAGTLVRTRVGEVSQVG
RNTQGVTLIRTAEDESVVGLQRIEEVDDEELPAGEEAEALESTDENTQQDTPEAPAADDA
EEGNEE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tatctagactatgcgatgtcagtcatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcgatgaacgtactaggcaacgattggaac
aaaccatataaaaaatcagcccgtgttgtcggcgacgtaatcggtaaatatcacccacac
ggtgatagtgctgtgtacgacacaatcgtacgtatggctcaaccgttctcgcttcgttac
atgctggtcgatggtcaaggtaactttggctctatcgatggcgactctgctgcggcaatg
cgttacaccgaagttcgaatggcaaaaattgcccatgaactattggctgacctagacaaa
gagaccgtagactacgtaccaaactacgacggtactgagcagatcccagcggttcttcca
actaaaattccaaacctattggttaacggtgcttctggtatcgcagtaggtatggcaacc
aacatcccgcctcataaccttggcgaagtgatcgatggctgtcttgcatacatcaataat
gaagaaatcactattgatgaactaatggattacattcctggtcctgatttcccaacggcg
gcgctgatcagtggtcgtaaaggcattgtagacgcgtacaaaacaggtcgcggcaaaatc
tacatgcgttcgaaagcggacatcgaagtggagaagaatggtaaagaaaccatcatcgtc
actgagatcccataccaggtaaacaaagctcgcttgatcgaaaagatcgctgagctagtt
aaagataagaaagttgaaggcatcagtgcactacgcgacgagtcagataaagacggtatg
cgtattgttattgaatgtaagcgcgacgctgtgggcgaagttgttctaaacaacctatac
gctcagactcagttgcaaaccactttcggtatcaacatggtggccctaaacaatggccaa
ccacagctattcaacctgaaagatatgttgaagtgcttcgttgatcaccgtcgtgaagtt
gtgactcgtcgtactattttcgaactacgtaaagcgcgtgaacgtgcccacatccttgaa
ggtttagcgctagcgcttgccaacattgatgaaatcattgagcttatccgtaaggcgcca
acaccggctgaagcaaaagcgggccttatcgctcgtggttgggatttaggcaacgtttca
gcaatgctagagcgtgctggtacagatgctgcgcgccctgaatggctagaacctcaatac
ggcatccgcgatggtcagtacttcctgacagagcaacaagcacaagcaattctagatcta
cgtttacataaactaacaggtctagaacacgagaagattcttggcgaatacaaaacactt
ctagaagaaatcgctgaactcatgcatatccttgcaagcactgagcgtttgatggaagtg
atccgcgaagaacttgaagcggttcgtgacggctttggtgatgctcgtcgtacagaaatt
acagctgcgagccatgatatcgacatggaagagctgatcgcacgtgaagacgttgtggtt
actctatcgcacggtggttacgttaagtaccaagtactgagcgactacgagtcacagcgc
cgtggtggtaaaggtaagagtgcgaccaagatgaaagatgaagaccatatcgagcgtctt
ctagtggcgaatacccacgataacatcttgtgtttctctactcgcggtaaaacataccgt
ctgaaagtttaccaattgcctctagcgagccgcactgctcgtggtaagccaattgtgaac
atccttccactagaagaaggtgagcgtattactgcgattctgcgtgttgatgaattctct
gaagacaaattcatcttcatggcaacaggtgacggtacggttaagaaaacgccgttgaac
caatttgcaaatgttcgttcaaatggtctgattgcggtaaacctacgtgaagacgattcg
ttaatcggtgtggatatcactaacggcgaaaacgaaatcatgctgttctctaaagcgggt
aaagtggttcgctttaaagaagcagaagaaattccagtacttgacgaaaatggtaagcca
gttcttgatgagaatggtcagccagagatcaagtttaaaggtgttcgtcctatgggtcgt
actgcctctggtgttcgtggtatgaaactggctgaaaatgaccaagttgtatcacttatc
gttccttcgcacgaaggcgacatcctaacggttacagaaaacggttatggtaaacgtaca
gcgctgagcgagtacccgacaaaaggtcgaggcactcaaggtgtcgtttctatcaaagtt
tctgagcgaaacggcccggtagttggtgctatccaggttgttgaaggtgatgaaatgatg
atgatcaccgacgctggtacactagtacgtactcgtgtgggtgaagttagccaggttggt
cgtaacacgcaaggtgtaacgcttatccgtactgcggaagacgaatctgttgttggcttg
caacgtattgaagaagttgatgacgaagagctgcctgctggtgaagaagcagaagcgtta
gagtcaacagacgaaaatacgcagcaagatactccagaagcaccagccgctgatgatgca
gaggaaggtaacgaagagtaa
DBGET
integrated database retrieval system
