Vibrio sp. D3: ACHFJ9_19295
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Entry
ACHFJ9_19295 CDS
T11387
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vii Vibrio sp. D3
Pathway
vii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACHFJ9_19295 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vii03400
]
ACHFJ9_19295 (recB)
Enzymes [BR:
vii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACHFJ9_19295 (recB)
DNA repair and recombination proteins [BR:
vii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACHFJ9_19295 (recB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XJJ28325
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Position
2:complement(2439045..2442719)
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AA seq
1224 aa
AA seq
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MSGAECPLHMLDRTEQPQPTPLEPMTFPLHGARLIEASAGTGKTFTIAGLYLRLLLGHGS
AETRHRVPLTVDQILVVTFTEAATAELRDRIRARIHDARIAFARGQSSDPVIQPLLNEFD
DHKQAAEILLQAERQMDEAAVYTIHGFCQRMLTQNAFESGSRFNNEFVTDESHLKAQVVA
DYWRRNFYPLPFTLAGEIRQLWSSPSALLSDISNYLTGAPLSLSVPAMKGSLADLHTGNL
KKIDELKALWRESQDDFFTLISDSDINKRSYTKKSLPSWLEAVNAWAATETTGYDYPDKL
EKFAQNVLLEKTPKGSAPQHAVFEAIETFLANPISLKAPLLAHAIEHCRVMLANAKNQKQ
WLSFDDLLTQLSASIDTDESELLAARIRTLYPVAMIDEFQDTDPLQYSIFSRIYLNNPEC
GLFMIGDPKQAIYGFRGADIFTYIKARNQVSAHYTLGTNWRSSADMVQAVNQVFAFPDSP
FIYDSDIPFLPVKYSPNAEKRIWTMGGQKQPALTYWLQEADDKPLPKGEYLTRMAEATAS
QIQTILTQAQQGQACLVNGEKQKAVQAGDIAVLVRTGSEGRMIKQALADQGIASVYLSNR
DSVFTSSVAQDLQRLLQAVLTPENDRALRASLASELFALDAASLDALNNDEIVWENAVNE
FKEYRKLWVQRGVLPMLRAVISKRHIAERLLEEGASSQGENGERVLTDLMHIGELLQQAS
NELDSDHGLLRWLAQSISDAENGLGGSDDQIQRLESERNLVQIVTIHKSKGLEYDLVFLP
FVFSYREASEAKYYDAANDRTVLDITGNDASMKQADKERLAEDLRLIYVALTRAVYACFI
GASPLRNGRSTKEPTGVHRSAIGYLIQNGQEGGINDLYQGLAKQQDELDCVVVAEPPPQL
EEKYVAPQEEIHDLSAKELQNPIDRNWRITSYSGLVKQGSHHAEHDATIEITGFDIDSSE
EQDEADLVEPERSIFTFPRGARPGTFLHSLFEEIEFTQPATTEENTQIILGLMESEQLDE
EWLPILQQLIDTVLATPLDGKSLLLNQKAPSQRLVEMEFLLPIEVLSAPALNRVIQRHDP
LSAKAGDLGFQTVQGMLKGFIDLVFEHQGKYYVLDWKSNHLGDDVTHYHGEALKSAMADH
RYDLQYQIYALALHRFLRSRLANYQYEQHFGGVYYLFLRGMDGQSDHGIFAAKPTFEFLQ
EMDRLIDGQALETRSTQAGQMELL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgcagagtgtcctctacatatgttagaccgcacagagcaacctcaaccaacg
ccactagaaccgatgacgtttcctctgcatggtgcgaggttaatcgaggcatcagcaggt
acaggtaaaaccttcactattgcaggtttatatctgcgccttttgcttggtcacggcagc
gcggaaactcgacatcgcgtaccgcttacggtcgaccaaattctggtcgtaacctttacc
gaagcggcaactgcggaattacgcgatcgtatcagggcaagaatccatgatgcgcgaatc
gcgtttgcgcgtggacagagttccgatccggtgatccaacctttgcttaatgagtttgac
gatcacaagcaagccgcagaaattttattgcaggcagagcgtcagatggacgaggcggcg
gtctacaccattcacggtttttgccaacgtatgctaacgcaaaatgcgtttgaatctggc
agccgatttaataacgagtttgtgaccgatgaaagtcacctaaaagcgcaagttgtagcc
gattactggcgccgcaacttctacccgttgccattcaccttggctggggaaattcgccag
ctatggagctctccatctgcgttgttgtctgacatcagcaattacttaactggtgcgccg
ttaagcctttctgttcctgcaatgaaaggcagtttggctgatcttcatactggaaatttg
aaaaaaattgatgaattaaaagcactgtggcgagaaagccaagatgacttcttcacgctg
atttcagattcagatattaacaaacgcagctacaccaaaaagtctcttccgtcgtggttg
gaggcggtaaacgcttgggcagcaacggaaaccacaggttacgattatccagacaagctg
gagaaattcgcgcaaaacgtcttgttggaaaaaacaccgaaaggcagtgcgccgcagcat
gcggtatttgaagccattgaaacatttcttgctaacccaatcagcttaaaagcgccactg
cttgctcatgcgattgagcattgtcgtgtgatgctggccaacgcgaaaaatcaaaaacag
tggctctctttcgatgatttgctgacgcaactttctgcttctatcgatacggacgaaagc
gagcttttagcggcgcgtattcgtactttgtatcctgtcgcaatgattgacgagttccaa
gataccgacccgcttcaatacagtattttcagccgtatttatctgaacaacccggaatgt
ggtttgtttatgatcggtgaccccaagcaggcgatttatggctttcgtggcgcagacatt
ttcacttatatcaaagcgcgtaaccaagtaagtgcccactacacgttaggaaccaactgg
cgttctagcgcagatatggtgcaggcggtaaaccaagtatttgcttttccagacagtcca
tttatctatgattcggacatcccgttcttacccgtaaaatacagtcccaatgccgaaaaa
cgcatttggactatgggtggtcaaaagcaacccgcgctgacttattggttgcaagaagcg
gacgataaaccgctaccaaaaggcgagtatttgactcgaatggcagaggcgaccgcaagc
caaatccaaaccattttgacgcaggctcaacaggggcaagcgtgtctggtgaatggcgaa
aaacagaaagcggttcaagcgggcgatatcgcggtgttggttcgaacaggtagtgaaggt
cgaatgatcaaacaagcgctagcagaccaaggtattgccagcgtgtacctgtctaatcga
gacagtgtgtttaccagttcagtggcgcaggatttacagcgtttgctgcaagcggtgctg
actccagaaaatgaccgtgcgctgcgtgcaagtcttgcttctgagctgtttgccctcgac
gcagcaagtttggatgcacttaataacgatgaaattgtgtgggaaaacgccgtaaacgaa
ttcaaagaatatcgcaaactttgggttcaacgtggtgtgctgccgatgttgcgcgcggtg
atcagcaaacgccatattgccgagcgattactagaagaaggtgcgagttcacagggtgag
aatggtgagcgagtacttaccgatttaatgcacatcggtgaactgcttcaacaagccagt
aatgaactggatagcgatcacggtctgctgcgttggctcgctcagtctatcagtgatgcg
gaaaacggtttgggtggcagtgatgaccaaatccaacgtttagaatcggaacgtaactta
gtgcagatcgtaactattcacaaatcaaaaggcttggagtatgacctcgtatttctgccg
tttgtgttcagctatcgagaagccagtgaagccaaatattacgatgcagccaatgaccgc
acggtactggatatcactggcaacgatgcgtccatgaagcaagcggataaagagcgtttg
gcggaagacttacgcttgatatacgtggcgttaacgcgtgctgtgtatgcgtgttttatc
ggtgcctcacctttacgcaatggccgttcgaccaaagagccaaccggtgtacaccgcagt
gcgattggctatttgattcaaaatggtcaagaaggtggcattaacgatttgtaccaaggt
ttagcaaagcaacaagacgagcttgattgtgtcgttgtggccgaaccgccgccgcaactc
gaagagaagtacgtagcgccacaagaagaaatacacgatcttagcgcgaaagagctgcaa
aaccctatcgacagaaactggcgcatcaccagttattctggcttggtcaagcaaggctct
catcacgccgagcatgatgccacgattgagattacgggttttgatatcgactcatctgaa
gagcaagacgaagcggatttggtggagccagagcgttctatttttaccttccctcgcggt
gcgcgtccgggtacgttcctgcacagcctgtttgaggaaattgaatttactcagccagcc
acgacggaagagaatacacaaatcatccttggtttgatggaaagcgaacagctcgatgaa
gagtggttacccattttacagcaattgattgataccgtactcgcaacgccgttggatggt
aagtctttgctgctgaatcaaaaagcaccgtcgcaacgtttggtggagatggaatttttg
ctgccgattgaagtgttgtctgcaccggcgttaaaccgagtcattcaacgtcacgatccg
ttgtcggcgaaagcgggggatttaggtttccaaaccgtgcaaggtatgctcaaaggcttt
atcgacttggtgtttgaacatcaaggtaaatactacgtgcttgactggaaatcgaatcat
cttggcgacgatgtgacgcattatcatggtgaggctctgaaatcggcgatggcggatcac
cgctacgatttgcagtatcagatttatgcgttagcactgcatcgttttctacgcagccga
ttggcgaattatcaatatgagcagcacttcggtggcgtgtattacttgttcttgcgcggc
atggatgggcagagtgaccacggcatttttgccgcgaaaccaactttcgagttcttacaa
gagatggatcgtttgattgatggtcaagcacttgaaacgcgctcaactcaagccgggcag
atggagctactttaa
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integrated database retrieval system
