Vibrio sp. D3: ACHFJ9_19300
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Entry
ACHFJ9_19300 CDS
T11387
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vii Vibrio sp. D3
Pathway
vii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACHFJ9_19300 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vii03400
]
ACHFJ9_19300 (recC)
Enzymes [BR:
vii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACHFJ9_19300 (recC)
DNA repair and recombination proteins [BR:
vii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACHFJ9_19300 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
XJJ26226
LinkDB
All DBs
Position
2:complement(2443047..2446538)
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AA seq
1163 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELIRISPLENPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWDMFTQVLPDVPKRSAFNKEAMTWKLMHLLPGLLNQEVFSPLAQYLKDDSD
HSKLYQLAEKIADIFDGYLVYRPEWIASWEAGLSVPELEDEHPWQPILWQALYDHTVSLG
QSPYHRANLYEHFIDTLASFNGNFDHLPKRLFVFGISSLPPRYMDALKAIGEHIDVHLMF
TNPCRYYWGEVRDRKYLARLAAKHRQHVVWQDDHSEVQGETEQLKGSLEDNVIDELHTDV
VGNSLLASMGKLGRDNMYLLSQLESHEIEAFVDVERDSLLHQLQADILNLEEHQDDQQIE
NSHHKQVVRLGDKSLSLHACHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVADINAYS
PAIQAVFGNAPGERFIPYSISDRTADQESPILAAFMQLVNLPNTRCLASELLELLETPAI
LKRFELSEDDFLQAKQWVEESGIRWGLDANTGREFELPETRQNTWQFGIQRMLLGYAMPE
SAGLFETEQGSLSPYNEVQGMGAELAGKLAHFIQQISTYRSKLSHVQTIDSWRETLVSLL
DDFFSVELEGEMALKSIRDTLSQLKEQLADAAFDDALSPSIISQYLQNKLSGTRVSQRFL
AGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSMPPEGFDLMTGRAKPGDRSRRDDDRYL
FLEAMLSAQQTLYISYVGRSIQDNTERVPSVLVSELMEYCHQNYCLSGDEALPVDESGDN
LLNALVNTHAMVPFSPSAFQGTHASYAKEWIPAALTQSSQSQGYVRRDFNRALDDYLLGA
TFPLELDLVELQRFWRLPVQYFFNRRLKVIFEPPLPVMEDDEPFVLGGLESYQMRDELLE
TLLETTLTQPEKKAEVLKHFMSQQRAQGKLPVGAFGDIEFETNRVQAEELVDKLAFLSGA
PQDDLEIDLTFDSLFERNEGEEKNVRLTGWLTQCYQSGLIRYRSGKIRSQDYLAAWIDHL
AMSASGHAKKTHLIGYDRKEGALHLIYPEITDAQYAKQLLTELVRLFFEGMTKPLPYFPK
TALACVEAGFSRGQWVDDEEKSLKKMTDAFNDGFMSPGEGNNAYISRIWPAWNDELASEV
RLLTALVLQGARLAVQDADDVKA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttatcattccaaccaagttgacgttctcaaatcactccttgtcgaactg
attcgaatcagtccgctggaaaacccgttcgaaaaagaacaaattctggttcaaagtccg
ggcatgtcccagtggctaaaaatggaattggccaaagagtttggtgttgccgcgaacatt
gattttccgcttcctgctaccttcatttgggatatgtttacgcaggtgttgccagacgtg
ccaaaacgcagtgcgtttaacaaagaagcgatgacgtggaagttgatgcatctgcttccg
gggcttctcaaccaagaggtgttttcgccgttagcgcagtacctcaaagatgacagtgac
cactctaagctgtatcagctggctgagaaaattgccgatattttcgatggttacttggtg
tatcgtccggaatggatcgcaagttgggaagctgggctgagtgtgccagagctggaagat
gagcatccgtggcagccgatcctatggcaagcgttgtacgatcacactgtgtcattagga
cagtctccatatcaccgtgccaacctttatgagcactttatcgacacattagcgagtttt
aacggcaattttgaccatttacccaagcgtttgtttgtttttggtatttcttcgttgccg
cctcgctatatggatgcgctaaaagcaattggtgaacacatcgacgtgcatctgatgttc
accaacccgtgtcgttattactggggtgaagttcgagatcgcaaatatctggctcgtttg
gcggcgaaacatcgtcagcacgttgtgtggcaggacgatcactcggaagtgcaaggtgaa
actgagcaactaaaaggttcattggaagataatgtgatcgatgagctgcacaccgatgtg
gtcggaaacagtctgttggcgtccatgggtaaactcgggcgtgacaatatgtatctgttg
tctcagctggagtctcatgaaattgaagcgtttgttgatgttgagcgcgacagtctgctc
catcaattgcaagcggatattctcaatcttgaagaacatcaagatgaccaacagattgaa
aacagtcatcacaaacaagtggttcgcttgggtgataaatcactcagcctgcacgcttgc
cacagcccgatgcgtgaagtggaagtgctgcatgatcaactattggcgatgttcgatgct
gacccaacgttaaaaccgcgcgatattatcgtgatggtcgcggacatcaacgcttacagc
cctgcgattcaggcggtctttggtaacgcaccgggtgagcgttttattccctattcgatt
tctgaccgaaccgccgatcaagagagcccaattctggccgcatttatgcagttggtgaac
ttacccaatacgcgctgtttggcatcagaactactcgaacttctggaaactccggcgata
ttaaagcgttttgaactcagcgaagatgatttcttacaagctaaacaatgggttgaggaa
tcgggaattcgctgggggttggatgccaataccggacgcgaatttgaactgccggaaacc
cgtcaaaacacatggcaatttggtattcaacgcatgttgcttggctacgcgatgccagaa
tccgcaggtttgtttgaaaccgagcaaggcagtttgtctccgtacaacgaagtgcaaggc
atgggcgcagagcttgcgggcaagttggcacactttatccaacaaattagcacttatcga
agcaaactttctcatgttcagactattgatagttggcgagagacattagtttcactgctg
gatgacttcttctcggttgagttagaaggtgaaatggcgctcaaatccattcgagatacg
ctcagccaactcaaagagcaattagctgatgccgcatttgatgatgcgttatcgccgtcg
atcatcagccaataccttcaaaacaaattatctggcacacgagtcagccagcgcttcctt
gctggtcaagtgaacttctgtaccttgatgccgatgcgctctattccgtttagaaccgtt
tgtctactggggatgaatgacggcgtgtacccacgctccatgccgccagaaggctttgac
ttgatgacgggaagagccaagccgggcgaccgttcgcgccgagatgatgaccgttaccta
ttcctcgaagcaatgctatcggcacagcaaacgctgtacatcagttatgttggccgttca
atccaagacaacaccgagcgagtgccctcggtattggtttctgagctgatggaatactgc
caccaaaactattgtttaagtggtgatgaagcgttgcccgttgatgagtctggcgacaac
ttattaaatgcgttggtgaatacccacgccatggtgccgtttagcccaagtgcgttccaa
ggcacgcacgccagttacgcgaaagagtggattccagcggcattgactcaaagtagtcaa
tcgcaaggctatgttcgtcgtgattttaatcgtgcattagacgactatctgttaggagcg
acgttcccacttgagctcgacttagtcgagttgcaacgtttctggcgcttaccggtgcag
tattttttcaatcgtcgcttaaaagtaatctttgaaccaccactaccagtgatggaagac
gatgaaccctttgttttaggtggtttggaaagctatcaaatgcgtgatgagctgttagaa
accttacttgaaacgacattgacgcagccagagaaaaaagcagaggtgcttaaacacttt
atgagtcaacagcgcgcgcaaggcaaactgccggtgggggcgtttggtgatatcgaattt
gaaaccaaccgagttcaggcggaagagctggtggataaactggcgtttttatctggtgcg
cctcaagacgatttggaaatcgacctgacgtttgattccttgtttgagcgaaatgaaggc
gaagagaaaaacgttcgcctaacaggttggctaactcaatgctaccaatccggtttgatt
cgctatcgaagcggtaagattcgatcgcaggattaccttgctgcgtggatcgatcacctt
gctatgtcggcgtcgggtcatgctaagaaaacccatctgattggctacgatcgtaaagaa
ggcgcgctgcatttgatctacccagaaattaccgatgcgcagtatgccaaacagctactg
actgaattagttcgcttgttcttcgagggtatgactaagcctttaccttatttcccgaaa
acggcgttggcttgtgttgaagcgggctttagccgcggtcagtgggtcgatgacgaagag
aaatctttgaagaaaatgactgacgcattcaatgatggcttcatgagtccgggcgaaggc
aataacgcgtacatctctcgaatttggcctgcttggaatgatgagttggcctcagaagtt
cgtttgctgacagcattagttctgcaaggtgcgcgtttagcggttcaagacgccgatgac
gtaaaagcgtaa
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integrated database retrieval system
