Vibrio sp. D3: ACHFJ9_19665
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Entry
ACHFJ9_19665 CDS
T11387
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vii Vibrio sp. D3
Pathway
vii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACHFJ9_19665 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vii03019
]
ACHFJ9_19665 (pnp)
03016 Transfer RNA biogenesis [BR:
vii03016
]
ACHFJ9_19665 (pnp)
Enzymes [BR:
vii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACHFJ9_19665 (pnp)
Messenger RNA biogenesis [BR:
vii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACHFJ9_19665 (pnp)
Transfer RNA biogenesis [BR:
vii03016
]
Prokaryotic type
tRNA degradation factors
ACHFJ9_19665 (pnp)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XJJ26296
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Position
2:complement(2528835..2530970)
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AA seq
711 aa
AA seq
DB search
MFEKPVVKTFQYGNHTVTLETGVIARQATAAVMVTMDDTSVFVSVVGKKEAVAGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPDAFKNEVQVIATVMS
VNPDVQPDIVTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSQTELETSKLDLVV
AGTESAVLMVESEADNLTEEEMLAAVVYGHDQQQVAIKAINEFKAEVATPAWDWVAPEEN
TALKDKIAELAEAKLVEAYKITEKMARYDRINEIAAEVNEVLLAEDPEADTKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQAIVTATLGTQ
RDAQIIDELTGERKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSVD
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNTGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDE
AISGAREDISEFAPRIHTMKISAEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TEGTAAKEAIRRIEEITAEVEVGRIYTGKVARLADFGAFVTVLPGKDGLVHISQIAEKRV
EKVSDYLAEGQEVQVKVLEIDRQGRVRLSMKEAVEKPAEEAAAEAPAAKDE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaccagttgttaaaacgttccagtacggtaaccacacagttactttagaa
actggcgttattgcacgtcaagctacagcagcagttatggtcacaatggatgatacgtct
gtattcgtatctgttgtaggtaaaaaagaagccgttgcaggtcaagacttcttcccacta
acggttaactaccaagagcgtacttacgctgcgggtaaaatcccaggcggcttcttcaag
cgtgaaggtcgtccttctgaaggcgaaacgctaaccgctcgtctaatcgaccgtccaatc
cgtccgctattcccagacgcatttaaaaacgaagttcaggttatcgcgacagtaatgtct
gtaaacccagatgttcagccagatatcgttacaatgatcggtacttctgctgctcttgct
atctctggcattccattcaacggccctatcggtgcggcgcgtgttggtcatatcgatggt
cagcttgtacttaaccctagccaaactgaactagaaacttctaagcttgatcttgttgtt
gctggtacagaatcagccgtactgatggttgaatcagaagcggacaacctaactgaagaa
gaaatgctagcagcggttgtttacggtcatgatcaacaacaagttgctatcaaagctatc
aacgaattcaaagcagaagtagcaactcctgcttgggattgggttgctcctgaagaaaac
acagcacttaaagataagattgcagagctagcagaagcgaagcttgttgaggcttacaaa
atcactgagaagatggctcgttacgaccgtatcaatgagatcgctgcggaagtaaatgaa
gttcttcttgctgaagatcctgaagcggatacaaaagaaatccacactatcttccatgat
ctagagaaaacagttgtacgtcgtagcatcatcgcgggtaaccctcgtatcgatggccgt
gaaaaagacatggttcgtgcactagatgtacgtactggtgttcttcctcgtactcacggt
agcgcgctattcactcgtggtgaaactcaggcgatcgttactgcaacgctaggtactcag
cgtgatgctcaaatcatcgatgagctaactggtgagcgtaaagatcacttcctactgcac
tacaacttccctccatactgtgtaggtgaaactggttttgtaggttctcctaagcgtcgt
gaaatcggccacggtaaactggcgaagcgtggtattgctgcagtaatgccttctgttgat
gagttcccatacacagtacgtgttgtgtcggaaatcactgaatctaacggttcatcttca
atggcttctgtatgtggtacttctcttgctcttatggatgcaggtgtgccaatcaagtct
tctgttgcgggtatcgcaatgggtcttgttaaagaaggcgacgacttcgttgttctttct
gacatccttggtgacgaagaccacctaggtgacatggactttaaagtagcgggtactaac
actggtatcacagcacttcaaatggacatcaagatcgaaggtatcactaaagagatcatg
caaattgcgcttaaccaagctcaaggtgcacgtaagcacatcctatctgtaatggatgaa
gctatctctggtgctcgtgaagacatctctgaatttgctcctcgtattcacacaatgaag
atcagcgcagagaagatcaaagacgttatcggtaaaggtggtgcagttatccgtgctcta
acggaagagactggtacaactatcgaaatcgaagacgacggtactatcaagattgctgca
actgaaggcactgctgcgaaagaagctatccgccgtatcgaagagatcactgctgaagtt
gaagttggccgtatctacacgggtaaagttgcacgtctagctgacttcggtgcattcgta
acggttcttccaggcaaagatggtctggtacacatttctcaaatcgcagaaaaacgtgtt
gagaaagtgtctgactacctagctgaaggccaagaagttcaagttaaagttcttgaaatc
gaccgccaaggccgtgtacgtctaagcatgaaagaagcggtagaaaagccagctgaagaa
gctgctgctgaagcaccagctgcgaaagacgagtaa
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