Vibrio sp. D3: ACHFJ9_20225
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Entry
ACHFJ9_20225 CDS
T11387
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vii Vibrio sp. D3
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vii03016
]
ACHFJ9_20225 (truD)
Enzymes [BR:
vii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ACHFJ9_20225 (truD)
Transfer RNA biogenesis [BR:
vii03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACHFJ9_20225 (truD)
Prokaryotic type
ACHFJ9_20225 (truD)
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NCBI-ProteinID:
XJJ26393
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Position
2:complement(2657295..2658338)
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AA seq
347 aa
AA seq
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MSDILSSLAYLTGKPVASAKIKAQPEHFQVREDLGFAFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGETPDFSAFLAQYPSIEILATDRH
NKKLRPGDLIGNEFVVTLSEVTDVEDVEQRLEKVKQVGVPNYFGSQRFGNDGNNLEEARR
WGRENVRTRNQNKRSMYLSAARSWIFNRIVSARLESGVFDKFIDGDIAQTSSGTQLVDAS
NIADLQAQFAAGEVAITAALAGDNALPTQADALTLEQPFLDEEPDLMALIRGNRMRHDRR
DIALKPKDLAWTVEGNNITLTFSLDAGSFATSIVRELVNEVEVEREY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcttcattggcttatctaacgggtaagcctgttgcatcggcaaaa
atcaaagcgcaaccagaacattttcaggttcgtgaggatttaggttttgcctttacgggc
gaaggcgagcacctaatggtgcgcattcgaaaaactggagaaaataccagttttgttgcg
aatgagttggcgaaagcttgtggcgtaaagtcgaaagacgttagctgggcaggccttaaa
gaccgccatgccgtgacggaacaatggctgagtgtccatttaccgaaaggggaaacgccg
gacttctcggcattcctagctcaatatccgagtattgagatcttagcgactgatcgacac
aacaaaaaactgcgtcctggagacttaatagggaacgagtttgttgtcactttgtctgaa
gtgactgacgttgaagatgtagagcaacgccttgaaaaagtgaaacaagttggtgtgcca
aactactttggtagtcagcgttttggcaatgatggcaacaaccttgaagaagcacgtcga
tggggacgcgaaaacgttcgtacccgtaatcaaaataagcgcagcatgtatttatcagca
gcgcgttcgtggatcttcaaccgtatcgtttctgctcgtctagaaagtggtgtgtttgat
aaattcatcgatggtgatattgcacagacaagttctggcactcagttggttgatgcaagc
aatatcgcagatctacaagcacaatttgctgcaggtgaagtggcaattaccgcggctcta
gcaggtgataatgcgcttccaactcaagcggatgcgcttactttagaacaaccgttctta
gatgaagagcctgatctcatggcgctgattcgtggtaatcgcatgcgccacgaccgtcgc
gatattgcgctgaagccaaaagatttagcttggacggttgaaggtaacaacattacgctg
actttctcactggatgcgggatcttttgcaacctctatcgttcgtgagttagttaatgag
gttgaagtagaaagagaatactaa
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