Vibrio sp. D3: ACHFJ9_22580
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Entry
ACHFJ9_22580 CDS
T11387
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vii Vibrio sp. D3
Pathway
vii00300
Lysine biosynthesis
vii00470
D-Amino acid metabolism
vii01100
Metabolic pathways
vii01110
Biosynthesis of secondary metabolites
vii01120
Microbial metabolism in diverse environments
vii01230
Biosynthesis of amino acids
Module
vii_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACHFJ9_22580 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACHFJ9_22580 (dapF)
Enzymes [BR:
vii01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACHFJ9_22580 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XJJ26785
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Position
2:complement(3142358..3143188)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILNIEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGEKTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPL
LESHERFPERVNAGFMQVVSRDHIRLRVYERGAGETQACGSGACAAVAVGILQGLLDENV
KVSLPGGELRIAWQGPGKPLFMTGPTTHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccacttttccaaaatgcacggtttgggcaacgacttcatggtcgtcgactgt
attacccagaacgtgtttttctcgcaagacctgatccgccgtttggcggatcgtcatacc
ggcgttggttttgaccaattgctcgtggtagaagccccttacgaccctgaaactgatttc
cattatcggattttcaatgccgatggtagtgaagtcgagcagtgcgggaatggcgcgcgc
tgcttcgcgcgctttgttcgcttgaaagggttgaccaataaatacagcatcagcgtgagc
accaaaaaaggaaagatgattctcaacatcgaagatgatggagaagtgacggtcaacatg
ggtgtgccagagtttgagccgaacaaaattcctttcaaagccaagcaaaaagagaaaacc
tacatcatgcgcgctggtgaaaaaacgttgttctgtggcgcggtaagcatgggtaacccg
catgtggtgacggtggtcgatgacgtggatactgctgatgtcgatacattaggtccgctg
cttgagtcgcacgagcgtttcccagagcgcgtcaacgctggctttatgcaggtggtgagt
cgtgaccatattcgtcttcgagtttacgagcgaggcgcaggtgaaacacaagcttgtggt
agcggcgcatgcgcggcggtagcggtagggattcttcagggtctgctggatgaaaacgtt
aaggtttctctaccaggtggtgaactgcgaattgcgtggcaaggtccgggtaagccgttg
tttatgaccggacctacaacgcatgtatttgatggtcaattgtcttgctag
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