Vibrio sp. D3: ACHFJ9_22925
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Entry
ACHFJ9_22925 CDS
T11387
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vii Vibrio sp. D3
Brite
KEGG Orthology (KO) [BR:
vii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vii03009
]
ACHFJ9_22925 (rsmB)
Enzymes [BR:
vii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
ACHFJ9_22925 (rsmB)
Ribosome biogenesis [BR:
vii03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
ACHFJ9_22925 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Methyltransf_31
Methyltransf_37
Methyltransf_5
Cons_hypoth95
MTS
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_15
TrkA_N
Methyltransf_36
Motif
Other DBs
NCBI-ProteinID:
XJJ26836
LinkDB
All DBs
Position
2:3210744..3212027
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AA seq
427 aa
AA seq
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MNVRAAAANVLYLVVDKGHSLSSALPAAQQTVRPRDHALLQEICYGALRYLPRLEMIANQ
LMDKPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVGETVEGTKELKGPRLRGLINAVLRN
YQRNQEELDQMAVSNNAGKYGHPSWLLKLLQEAYPQQWESIVEANNQKAPMWLRVNHQHH
TRDEYLALLKNENIDSTPHTEAMDAIKLAAPCDVMKLPGFEKGWVSVQDAAAQLSINYLK
PQDGELILDCCAAPGGKTAHILERTSGSEVVAIDCDDTRLKRVHENLKRLNLQAKVVCGD
ARNPQEWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQSEIFDAMWTQ
LKPGGTMVYATCSITPQENVEQVKAFLARTADAQLLDSDPDQPGRQILPGEEDMDGFYYA
VLTKTHA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcgctgcggctgctaacgtcctgtatcttgtcgtcgacaagggccactca
ctttcaagcgctcttccagcggctcaacaaacggtacgacctcgtgaccacgctctgtta
caagagatctgttacggtgcgctacgttacctacctcgcctagaaatgatcgcaaaccag
ttgatggataagcccctcaaaggcaaacaacgtgtattccatcacttaattctggttggt
atttaccaactgagcttcatgcgcattcctgcacacgcagctgtcggtgaaacggttgaa
ggcactaaagagctgaaaggtcctcgtctgcgtggtttgattaacgctgtattgcgtaac
taccaacgcaaccaagaagaactcgaccaaatggccgtcagcaacaacgctggcaagtac
ggtcacccaagctggttactaaaactgctgcaagaggcatacccacagcaatgggaaagc
attgttgaagcgaacaaccaaaaagcgccaatgtggctgcgtgtgaaccaccaacaccac
actcgtgatgaataccttgcgctactcaaaaatgaaaacattgatagcacgccacacaca
gaagctatggacgccataaaattggccgcaccatgtgatgtgatgaagctacctggtttt
gagaaaggttgggtttcggtccaggatgcggcggcgcagctctcgatcaactacctaaaa
ccacaagacggcgaactgattttagattgctgtgctgcgccaggtggcaagacggcgcac
attctagagcgcacgtcgggcagtgaagtggtcgcgattgactgcgacgacacacgcttg
aaacgtgtgcatgaaaacctgaagcgtctcaaccttcaggcaaaagtggtttgcggtgat
gcgcgtaatccacaagaatggtggcaaggcgagcaatttgatcgcattttgctggatgcc
ccatgttctgcgactggcgtgattcgtcgtcacccagacatcaaatggctacgtcgtgca
gacgacatcgccgcattagcagagctgcaaagtgaaatttttgatgccatgtggacgcag
ctgaaacccggcggcacaatggtttacgcgacttgttcaatcacaccgcaagaaaacgtg
gagcaagtaaaagcgtttttagcacgtaccgcggatgcgcaactgctggattctgatccc
gaccagcctggtcgtcaaattctaccaggcgaagaagacatggatggtttctactacgca
gtgctaaccaaaacacacgcgtaa
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