Viridibacillus arvi: JNUCC6_00620
Help
Entry
JNUCC6_00620 CDS
T06874
Name
(GenBank) penicillin-binding protein
KO
K08724
penicillin-binding protein 2B
Organism
vij
Viridibacillus arvi
Pathway
vij00550
Peptidoglycan biosynthesis
vij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JNUCC6_00620
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vij01011
]
JNUCC6_00620
Peptidoglycan biosynthesis and degradation proteins [BR:
vij01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JNUCC6_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
QOV13267
LinkDB
All DBs
Position
125167..127308
Genome browser
AA seq
713 aa
AA seq
DB search
MLILYGGLFFAMFFRIFFIQASGQVEGEALAAKAAAKYERSKVISANRGKILDRQGQVIA
EDTINYRLVAVISPKASKGTKRIMHVSDKEKTAKVLAKYLTISEKDIFDKLNTKAKNAQG
NEIRQVEFGAAGRNISHGVMQKISNEKLPGIIFMEESKRFYPNGIFASNLIGLAQRDTQE
GGQSRTVGKMGLESIYNKELSGTDGWVQYKSDLWGYLLPNSDKMVEPSKDGADVYLTIDK
TIQNFLEDSMSKVNKEYNPESMVAVVANPKTGEILAVSQRPTYNPQDGTGLENSWLNQLT
ELTIEPGSTMKTFTLAAAIEEGKWFPNAKFQSGQYMVGNVPIGDHNDRKGWGTITYLEGI
QRSSNVGMAHLLKLIGDDKFISYVEKFGFGEKTGIDLPNEATGQILDKYPINRVTTTYGQ
GSTVTPIQLIQAVSAIANDGKMMQPYVIEKIENPNTKKIVKENKPTIIGKPISKRTSKEV
REILTTTITSEFGTAKDFASKEYEVSGKTGTAQMPDPSTGEYDKRGKNYFLYSFLGMAPV
DNPQLVMYIAVGKPKLGPTEVGSEPTSKVFNTVMGSSLKYLNIKPEKNKKTKSQTMENLK
GKLVEEIEKELEGNGIKTIIIGNGDTITDQYPTEKSEVLSGGFVFLKTDGDSIVPDFTDW
SLRNVLTYKTMASANIEIIGEGYVQKQSVKAGTVLNGNKKIILNMKKPEEHYK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcctttatggaggactctttttcgctatgtttttccgtatcttttttattcaa
gcttcaggacaggtagagggagaagctttggcggcgaaagcggccgcaaaatatgaaaga
tcaaaagtaatttcagctaatagaggtaaaattctagatcggcagggacaagttatagca
gaagatactattaactatcgcttagtagctgtaattagtccaaaggcttctaagggaact
aaaagaattatgcatgtttcagataaagagaaaaccgccaaagttttagcgaaatatctt
actattagtgaaaaagatatatttgataaattaaatacaaaagcgaagaatgcgcaaggt
aatgaaattcgccaagtagaatttggtgctgcaggtcgtaatattagccatggcgtaatg
cagaaaattagtaatgaaaagctaccaggcatcatttttatggaagaatcaaagagattt
tatccaaacggtatctttgcatcgaatttaataggcttagctcaaagggatactcaagaa
ggcggacaatctagaacggtaggtaaaatgggcttagaatccatctataacaaagaatta
tccggtactgatggatgggtccaatataagagtgatttatggggttatttactacctaat
agcgataaaatggtagaaccttcaaaagatggagcagatgtgtatctaacgattgataaa
actatacaaaactttttagaagattcaatgtctaaagttaataaagaatataatcctgaa
tcgatggtagcagtcgttgccaatccgaagacgggtgaaatacttgctgtatcgcaaagg
ccaacatataacccgcaagacggtactggacttgaaaatagttggttaaaccagttaaca
gagttgacgatagagccaggttctacaatgaagacttttacattagcagctgcaatcgaa
gaagggaaatggtttccaaacgctaagtttcaatctggtcaatacatggtaggaaatgta
ccaattggagatcataatgacagaaaaggttggggaacgatcacctacttagaaggaatt
cagcgctcctccaatgtagggatggcacatcttttgaaattaataggtgatgataaattc
atttcttatgtagaaaaatttggttttggtgaaaaaacaggaatagatttaccaaatgaa
gctacaggtcaaatcttagataaatatcctattaaccgtgtaacaacaacttatggacaa
ggctctacagtcacaccgatacaattaatacaagctgtttcagctattgcgaacgatggg
aaaatgatgcaaccatatgttattgagaaaatcgagaatccaaatacgaagaaaattgtc
aaagaaaacaagccgactattataggtaaacccatttctaagcgaacgtcaaaagaagtt
agagagattttgactactactattacttctgaatttggaaccgctaaagattttgcaagt
aaggaatatgaagtatcaggtaaaacaggtactgcgcaaatgccagacccatcaacgggc
gaatacgataaaagaggaaaaaattattttctgtattcgtttttaggtatggctcctgta
gataatcctcaattagtgatgtacattgccgtaggaaaacctaaacttggcccaacagaa
gtgggctctgagccaacatcaaaagtatttaatacagttatgggaagtagtttaaagtac
ttaaatattaaacctgaaaaaaataagaaaacgaaatctcaaacgatggaaaacttaaaa
ggcaaactcgttgaggaaattgaaaaagaacttgagggaaatggcatcaaaacaattatt
ataggtaatggtgatacaattacggatcaataccctacagaaaaatcagaagtcttatct
ggtggttttgtatttttgaagacagatggagattcaatagtacctgattttacagattgg
tcactccgtaacgtattaacatataaaacaatggcgagtgcaaatatagaaattatcggc
gaaggctatgtacaaaaacaaagtgttaaagctggtactgtattaaatggaaacaagaag
attattctgaacatgaaaaaaccggaggaacattacaagtag
DBGET
integrated database retrieval system
