Viridibacillus arvi: JNUCC6_04380
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Entry
JNUCC6_04380 CDS
T06874
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vij
Viridibacillus arvi
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_04380
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JNUCC6_04380
Archaeal homologous recombinant proteins
JNUCC6_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
Mce4_CUP1
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QOV12015
LinkDB
All DBs
Position
complement(888794..891871)
Genome browser
AA seq
1025 aa
AA seq
DB search
MKPIQLKMTAFGPYKKTETIDFRELGDHRLFVISGATGAGKTTIFDGISFALYGSASGED
RADIKEIRSDFADDDTHTSAELIFEIHNRQYRVLRQLAHRKNGNKTATGETFELVEILPT
GEKPVVESQKVGEINKKIEDIIGLSKDQFKQIVMLPQGEFRKLLTSETENKEAILRKIFK
TESYRHIADQLKVKKEEADKQLQQAIAVRNLHTSKIVSTLPKRESALFDLLETNQFNMYQ
LVDALKIEVDYYDKQITEDEANYKAVGKQLEDKQRQQFEAVTLNQKIEAFKEKEQKLISL
RQQEPLFLEKERELAAAEKASHIIPIEQYYRVAKQKALQKEATAEEAKKSEQKMKLQLEE
VTAQFVVQQQKETERNDSLKRVIHLQSLEPIFKDLEKQNQIKNQLQQEVQQVHAVFTAQS
QQHKERMLALQALEEQSATLEETIQPLDDKIDQLAQLKDRAAAFHHWSTQQKKVQDLKDQ
VITKEKVYIEAQQKAKAEQDNWVASQASILASQLVDGAPCPVCGSTEHVAKHEETVEVID
EQQLEQIRKYASNLEQQYFVTNGQLQAEMQAFNALEQNLKELSVTVEEGPTLTNQYQDLF
VNVQQLKKEKELWNQLKEKTKSQKQAVDEFQLQLQQLEKTYQTQLQALNNATAIYDEKLK
SIPQDITSLHHLYQLTNEAIQQRTQLEESWTLLQKRMQQANEQNTTAQANLQHAITDLAE
SRKLLEQAQEDFKQAVENAGFEKGKDYLAARRDGSQCQKLKEECQQYKNTIHALSTQIDE
EKEQVVGKELVDLTLLTEAVNQLKQAYEMAFEQWNNSKKYRQNAHQLIIDLSEVSKNIAE
LEASCGRIIGLYDLLRGQNHMKISFERYVQIEYLEQIIHAANERLKPLSNGQFNLIRSDR
QEARGKQSGLGLDVYDAYTGQTRDVKTLSGGEKFNASLCLALGMSDVIQSFQGNIRIDTM
FIDEGFGTLDEESLTKAIDTLIDLQKSGRMIGVISHVAELKAAMPAILEVTKSREGHSHT
TFHVK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaattcaactgaaaatgaccgcatttggtccatataaaaagacagaaacaatt
gattttcgtgaattaggtgaccatcgcttatttgttatttctggtgctacgggagctggc
aaaacaactattttcgatggtattagttttgcgttgtacggtagtgcgagtggtgaggat
cgtgcagatattaaagaaattcgcagtgattttgctgacgatgatactcacacatctgct
gaactcatttttgaaattcataatcgtcaatatcgtgtacttcgtcagttagctcataga
aaaaatggcaataaaactgcaacaggtgaaacatttgaacttgttgagattctacctaca
ggagaaaaaccagtcgttgaatcacaaaaagttggagaaattaataaaaaaattgaagat
attatcggattatcaaaggatcaatttaaacaaattgtcatgttgcctcaaggggagttt
cgtaaattattaacttctgaaacagaaaacaaagaagcgatattacgtaaaatcttcaag
accgaatcttatcgacatattgcagatcaacttaaagtgaaaaaagaagaagctgacaaa
caattacagcaggctatagcagtccgtaacttacacacaagtaaaattgtaagcacgctt
cctaaaagagaatctgctctttttgatttactagaaacaaaccaatttaatatgtatcaa
ctagtagatgcattaaaaattgaagtcgactactatgataagcaaattacggaagatgaa
gctaattataaagcggtcggcaaacaacttgaagataagcaacgtcaacaatttgaagca
gttactttaaatcaaaaaatagaggcatttaaagaaaaggaacaaaaacttatttcttta
agacagcaagagcctctcttcctagaaaaagaacgtgagttagctgctgctgaaaaggct
agtcacattattccaatagagcaatattaccgtgtagcgaagcagaaggctttacaaaaa
gaagctacagctgaagaagccaaaaaatcagaacaaaaaatgaaacttcaattagaagaa
gtaactgctcaatttgtagtccaacaacaaaaagaaactgagcgtaatgacagtttaaaa
agggtcatacatttacaatctttagaacctatatttaaagatttagaaaagcaaaatcaa
ataaaaaatcaattacagcaagaggttcaacaagtgcatgcagtatttactgcacaaagt
caacaacataaagagcgaatgctcgcacttcaagcattagaagaacaatcagcaacttta
gaggagacaatacaacctctggatgacaaaattgatcaattagctcaattaaaagaccga
gcagcagcttttcaccattggtctacacaacaaaaaaaggtacaagatttaaaagatcaa
gtcattacaaaagaaaaagtatatatagaagcgcagcaaaaagcgaaggctgaacaagat
aattgggttgccagccaagcgagtattcttgcatcacagttagtagacggggcaccgtgt
ccggtatgtggcagcacggaacatgtggctaagcatgaagaaacagtggaagtcattgat
gagcaacaattagagcaaattcgcaaatatgcatcaaatttagaacaacaatacttcgtg
actaatggacaactgcaggctgaaatgcaagcatttaatgcactagagcaaaaccttaaa
gaacttagcgttacagtggaagaaggaccaacattaactaatcaatatcaagacttattc
gttaatgttcagcaattgaagaaagaaaaagagctttggaaccaactaaaagagaaaacg
aaatctcaaaaacaagctgtagatgaattccagctacaacttcaacaacttgaaaagact
tatcaaactcaactgcaagcactgaataatgcaacggcaatatatgatgaaaaacttaaa
tccattcctcaagacattacgtcgttacatcatttatatcagttaacgaacgaagctata
caacaaagaactcaattagaggaaagttggacacttcttcaaaagcgtatgcaacaagct
aacgaacaaaatacaacagcacaagcgaatttacaacatgcgataacggatttagcggaa
tcccgtaaattgcttgaacaagcgcaagaagactttaaacaagctgttgagaatgcaggc
tttgaaaaaggaaaagattacttagcagcgagaagagatgggtcacagtgtcaaaaacta
aaagaagaatgtcagcaatataaaaacacaatacatgcattatcgacacaaattgatgaa
gaaaaagaacaagttgtaggtaaagaattagtggatcttactttattaactgaggcagta
aatcagttgaaacaagcctatgaaatggcattcgaacaatggaataattcaaaaaaatat
cgtcagaatgcacaccaactgattattgatttatcggaagtaagcaaaaatattgctgaa
cttgaagcctcttgtggtcgaattattggtctttatgatttactacgaggtcaaaatcat
atgaaaatctcatttgagcgttatgttcaaatcgagtatttggagcaaattattcatgcc
gcaaatgaacgtcttaaaccactatcgaacgggcaattcaatttgattcgtagtgatcgt
caagaagcaagagggaagcaaagtggattaggtttagatgtctatgacgcatacacgggg
caaactcgtgatgtcaaaacgttatccggtggagaaaagttcaatgcctcattatgttta
gcacttggtatgtcagacgtgattcaaagtttccaagggaatatcagaattgatacgatg
ttcatagacgaaggtttcggtacgttagatgaggaatctttgactaaagcaatcgataca
ctgattgatcttcagaagtccggtcgtatgattggtgttatctcccatgttgcagaacta
aaagcagcaatgccagctattttagaagtcacgaaatcacgagaaggacatagccataca
acatttcatgtaaagtaa
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