Viridibacillus sp. JNUCC-6: JNUCC6_04385
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Entry
JNUCC6_04385 CDS
T06874
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vij
Viridibacillus sp. JNUCC-6
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_04385
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JNUCC6_04385
Archaeal homologous recombinant proteins
JNUCC6_04385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
QOV12016
UniProt:
A0A7M2QVW2
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Position
complement(891868..893037)
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AA seq
389 aa
AA seq
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MKIFHTADWHLGKLVQGVYMTEDQAYILQQFLADIDQEKPDVIIVAGDLYDRAVPPTEAV
RLLDDIFAEIVLKRHIPLISIAGNHDSPGRLHFGSQLMKESGLHIVGNLDDKLSPVVLND
EFGEVHFHLIPYADPSQVRYVFDDDSIKTHQSAMKRITDELKKKMDPEKRHIFVGHAFVT
SHGQEEENTSESERPLAIGGTECIDAALFEPFHYTALGHLHQAHFVLNETIRYAGSPLKY
SISEENHKKGYLIVDLAVDGQVTIEKKLLQPRRDMRTVEDTIDNLLKSEVSEDYIYVKLL
DDTPIISPMEKIRTVFPNAMHVERKMIHQKIDGTEQLTTSRQKMDDLTLFEAFYKEIVGA
EVEDATKQLFQEVLQEGLAKEREVGSDVK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatttcatacagctgattggcatttagggaagcttgtacaaggggtatatatg
actgaggatcaagcttatattttacaacaatttttggctgatatagaccaagagaagcca
gatgtcattattgttgctggtgatttatacgacagagctgtacctccgacagaagccgtt
cgattattagatgatattttcgcagagattgtgttaaaaagacatataccactcattagc
attgcaggaaatcatgacagtccaggtcgtttacatttcggtagtcagttaatgaaggaa
agcggtttacatatagtaggaaatcttgatgacaagctatcaccagtcgttctaaatgat
gagtttggagaggtacattttcacctaataccatatgcggacccttctcaagttagatat
gtgtttgatgatgattctattaaaacacaccaatctgcaatgaaacgtataacagatgaa
ttgaaaaagaagatggatccagagaaaagacatatttttgttggacatgcatttgtaact
tcccacggtcaagaagaggagaatacaagtgaatctgagagacctttagcgatcggtggt
acagaatgtatagatgcagcgctatttgaaccatttcattacacagctcttggacattta
caccaagcgcatttcgtattaaatgaaacaattcgctatgcaggctcacctttaaagtat
tcgatttctgaagagaatcataaaaagggctatttaatcgtggatttagcagtagatgga
caagtaacaatcgagaagaaattattgcaaccgcggagagatatgcgaactgttgaggat
acaattgataatttacttaaatcagaagtaagtgaagattatatttacgttaaattactt
gatgatacaccaattatttcaccaatggagaaaattcgtacagtctttccgaatgccatg
catgtggagcgtaaaatgattcatcaaaaaatagacggcactgagcaactaacgacatct
cgtcaaaagatggacgatttaacgctctttgaagctttttacaaggaaatagtaggggca
gaagtagaagatgcaacaaaacagctattccaagaagtgttacaagaaggattagcgaaa
gaacgtgaagtagggagcgatgtgaaatga
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