Viridibacillus arvi: JNUCC6_05640
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Entry
JNUCC6_05640 CDS
T06874
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vij
Viridibacillus arvi
Pathway
vij03420
Nucleotide excision repair
vij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JNUCC6_05640
03430 Mismatch repair
JNUCC6_05640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_05640
Enzymes [BR:
vij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNUCC6_05640
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNUCC6_05640
MMR (mismatch excision repair)
Other MMR factors
JNUCC6_05640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
Viral_helicase1
PhoH
SLFN-g3_helicase
DEAD
NACHT
AAA_30
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QOV12246
UniProt:
A0A7M2QWN6
LinkDB
All DBs
Position
1141266..1143602
Genome browser
AA seq
778 aa
AA seq
DB search
MGSEFLQEQKRVDSVIETITVRISKLEEETSRRQNELVNIRKHFFDEVKVNLDTFDDYLE
TIIGLRQEAQALTVSQSTDRHVSKQLSTLRRMKEVPYFGRIDFIEEGESAQEQIYIGIST
LTDASGEEFLIYDWRAPISSIYYEYQTGPAKYATLEGEIKGILEKKGQYLIRDGVLQSMF
DTSITIGDEILQQVLGKGTDKHMHNIVATIQQEQNRIIRHDRGKLLIVHGAAGSGKTSAA
LQRIAFLLYKNRESMNADQIILFSPNSMFNSYVSNVLPELGEENMHQVTFQEYLDHRLSK
EFQVENPYEQLEYVLTATNTPSYKSRVASIRFKASPLFFNAIELYMKSLEFSGMIFKDMI
FRGEPIVTAGQIAERFYSNDTSLRFHNRLEKLMDWLVKKINETQKAELTKPWVQEKIELL
SDEEYHKAHTYLAKKRGFTGESIADYEVEPEVLARLIVQQKLKPLRKRVGAFGFIDIKGI
YKQLFAEPLQIKQWIDGETPAEWTEICQATLEMLDESKLSYEDATPFLFMKEMIQGFQTN
GSIKHILIDEAQDYSPFQFEFLKRLFPSAKMTVLGDFNQAIFAHASEMDDFRTLMSLYGP
DETEVINMTRSYRSTKPIIEFTCRLVPNGERIIPFERDGELPVFTQLLNHTELHHCIASK
VATLRSQRYNSIAIICKSSEESKSAFEALSHIDDIKLVKSSSIEYEQGVVVIPSYLAKGI
EFDAVIIYDASEQVYGDESLRRAFYTACTRAMHHLQLYSVGEPTPLLRNVSRESYIQA
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagaatttctgcaggagcaaaaacgtgtggacagtgtaatagagacaataacg
gtgcgcatcagcaaattagaggaagaaacttctcgacgtcaaaacgaactggttaatata
cgtaaacacttctttgatgaagtcaaagtgaatcttgatacttttgacgattatcttgag
accatcatcggcttgagacaagaagctcaagctctaactgtaagtcaaagcaccgatcga
catgtatctaagcaattgtctacgcttcgacgtatgaaggaggttccctacttcggccga
atcgatttcattgaagaaggagaatctgctcaggaacaaatctatattggcatttccaca
cttacagatgcaagtggcgaagaatttcttatctatgactggagggcacctatctcaagc
atctactatgagtaccagactggaccggctaagtatgcaacacttgagggtgaaatcaaa
ggcattttggagaaaaaggggcaatatcttatccgtgacggtgttcttcaatccatgttc
gatacgagtatcaccattggagacgagattttacaacaggtactgggcaaaggcacagat
aaacatatgcacaatatagtagctacgattcaacaggagcaaaatcgaatcatccgtcat
gatcgtgggaaactgcttattgtacacggtgcagctggcagtggcaagacatcggccgcc
ctgcagcggattgcttttttactctacaaaaatcgcgaaagtatgaatgctgatcaaata
attctattttcaccaaattcgatgtttaacagctatgtatccaatgtactgccagaactt
ggagaagagaatatgcatcaggtcacatttcaggaatacttagaccatcggctgagtaaa
gagtttcaagttgaaaatccctacgagcaattggaatatgttctaactgctacgaacacc
ccttcctacaagtcaagggttgcgagcattcgattcaaagcatcacctctttttttcaat
gcgatcgaattatatatgaaatcgttagagttctctggaatgatattcaaggacatgatc
ttcagaggagaaccgattgttactgcgggccaaatagcagaaaggttttatagtaacgac
acttcactccgcttccataatagacttgaaaagttaatggattggctagttaagaaaatc
aacgaaactcaaaaggctgaactgacaaagccgtgggtacaggaaaaaatcgagctactt
agcgacgaggaataccacaaggcccatacctacttagcaaaaaaacgcggctttacagga
gaatcgattgctgattatgaggttgagcctgaagtacttgctcgattgattgttcaacag
aaattgaaaccgttacgtaaacgagtcggagcatttggtttcatcgacattaaaggaata
tataagcagctttttgctgaaccactgcagatcaaacagtggatagatggagaaacaccc
gcggagtggacggagatttgtcaagcaacgctggaaatgctggatgaaagcaaactatct
tatgaagatgctactccgttcttatttatgaaagagatgattcaaggctttcagacaaac
ggttcgataaagcacatacttattgacgaggctcaggattattcaccgtttcaattcgag
tttctaaagcgtttatttccttcggcaaaaatgactgtgctaggtgactttaatcaggca
atattcgcccatgcaagtgaaatggatgattttcgtacactaatgagcttatacggaccg
gatgaaacggaagtaattaacatgacacgcagctaccgatccacaaaaccgattatcgaa
tttacatgcagactagtacctaacggagaacggattatcccattcgaacgcgacggcgag
ctacccgtgtttacacaattactcaatcacactgaacttcaccactgcatcgcatccaaa
gttgcaactttgcgaagtcaacgttataacagtattgctataatatgtaaatcatctgag
gaaagtaaaagtgcattcgaagccttgtctcacatcgatgatattaaactcgtgaaaagc
agctcgattgaatatgaacaaggagttgttgtcattccatcgtatttagctaaaggcatt
gagttcgacgctgtcattatttatgatgcatcagagcaagtatatggcgacgaaagcctt
cgcagagcattttacaccgcctgtactagagctatgcatcatttgcaactttacagtgta
ggagaaccgaccccattattgcgaaacgtctcgcgggaaagttacatccaagcttga
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