Viridibacillus arvi: JNUCC6_08745
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Entry
JNUCC6_08745 CDS
T06874
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vij
Viridibacillus arvi
Pathway
vij03410
Base excision repair
vij03430
Mismatch repair
vij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JNUCC6_08745 (recJ)
03430 Mismatch repair
JNUCC6_08745 (recJ)
03440 Homologous recombination
JNUCC6_08745 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_08745 (recJ)
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JNUCC6_08745 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JNUCC6_08745 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JNUCC6_08745 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PGM_PMM_II
Motif
Other DBs
NCBI-ProteinID:
QOV12821
UniProt:
A0A7M2QYS0
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Position
complement(1753187..1755532)
Genome browser
AA seq
781 aa
AA seq
DB search
MVMTTKRWRIERPDEMLVKTFQKELGIPAISAKILAARGFDRVESARAFLNIDHQSTNDP
FLMHGMQQAVDRIHQAINNDEKILVYGDYDADGITSTAVMMTVLRDLGAKVEHKIPNRFT
DGYGPSERLFREAHEQNFKLIITVDNGISGNHEVQVAKELGMDVIVTDHHEIGDELPPAD
VIIHPRHPEGEYPFGELAGVGVAFKVAHALYGEFPKHLLEFVAIGTIADLVPLLEENRYL
VKQGILALQKSTRPSIKALCTVAGTKQNDITEETIGFGFGPRLNALGRLGDANPGVDFLL
EEDEVSAATMASLLNDKNKERQGIVSDITEQAVAMVENIDEIRNSQVLVIAEEGWNPGVV
GIVASRLVEKYYKPTIILCIDIEKGIAKGSARSIEGFNMYQELAKNRDILPAFGGHPMAA
GMTLAMEDVDELRERLDIQARECLTEEDLIPILQVDIPLKIDEIDTDSIAEVRELAPFGM
GFPKPMYGIEDEHIQSMRKIGANEDHLKMEIGQPDATIDAVGFHKGYLADELTYGINVSF
AGDLQINEWNGRKKPQFMISDVRTDEWQLFDLRGIRQVARWLQTVPVEESTFIAFKPDTM
QYYESLIPKKIMPYSEELSLDDVSPFVVLLDMPQDVQMLEDLLTNVKPTRIYAHFYIPDS
HYFDGMPTREQFGWYYTFLNKRREFHLRQHLNDLAKHKGWSRDMLIFMTQVFFELGFVTI
ENGLAKIVEGAPKKQLSSANVYKTRAQQMDLEQTLLYAPYKDLRQWFDARLSAQTVSEEE
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgacaacaaaaagatggcgaatcgaaagaccagatgaaatgcttgtaaagaca
tttcaaaaagaactaggtatacctgcaatatcagcaaaaatattagctgcacgtggtttt
gatagagtggaatctgcacgtgcttttttaaatattgatcatcaatctacaaacgatcca
ttcctaatgcacgggatgcaacaagcagtcgatcgtattcatcaagcaatcaataatgat
gagaaaatacttgtttatggtgattatgatgctgatggcattacgagtacagctgtaatg
atgacagttttgagagacttaggtgcgaaagtagagcacaaaattcccaatcgatttaca
gatgggtatggaccgagcgaacgattattccgagaagctcatgagcaaaacttcaagcta
attatcacggttgataatggtatttcaggcaatcatgaagtacaagtggcaaaagagctt
ggtatggatgtcattgtgacagatcaccatgaaattggagacgaattgccaccggctgat
gtcatcattcacccgagacatccagagggggagtatccttttggcgagcttgctggtgtt
ggtgtagcatttaaagtggcgcatgctttatacggtgaatttccaaaacatctgcttgaa
tttgtagcgattgggacaatagctgatttagtgcctttattagaagagaaccgttattta
gtaaagcaaggtattctagccctacagaaatcaacaagaccttcgataaaggcattatgt
acagtagcaggtacaaagcaaaatgacattactgaagagacaattggttttggatttgga
ccaagattaaatgcattaggacgacttggtgacgccaatcctggtgtagatttcttactt
gaagaagatgaggtaagtgcagcgacaatggcgagccttttaaatgataaaaacaaagag
cgccaagggattgtttctgatattactgagcaagctgttgctatggttgaaaatatcgat
gaaatccggaattcacaagtacttgttatagctgaagaaggctggaatccaggagtagta
ggaattgtagcttcaagacttgttgaaaaatattataagccgacaatcatcttatgcatt
gatattgaaaaagggatagcaaaaggttcagcacgtagtattgaaggctttaatatgtat
caagaacttgcaaagaatcgtgatattttaccagcgttcggcggacatccaatggcagct
ggtatgacactagcaatggaagatgtagatgaattacgtgaacgactagatatacaagca
agagaatgtttgactgaagaagacctaattcctattcttcaagtagatattcctctgaaa
atagatgagattgatacggattcaattgcagaagtaagggaattagccccgtttgggatg
ggttttccaaaacctatgtatggtattgaagatgaacacattcaatcgatgcgaaaaatt
ggtgccaatgaagatcatttgaaaatggaaattggtcaaccggatgctaccattgatgca
gttggctttcataaaggatatcttgcagatgagcttacttatggcattaacgtttctttt
gcaggtgatttacaaatcaatgaatggaatggcagaaagaagccacagtttatgatttca
gacgtacgtacggatgaatggcagctattcgacttacgtggaataagacaagttgctaga
tggttgcaaacggtaccggtagaggaatctacatttatagcatttaagcctgatacaatg
caatattatgaatctttaattccgaaaaaaattatgccatatagtgaagagttatcacta
gatgatgttagcccttttgtagtcttattagatatgccacaagatgtgcaaatgttagag
gacctattaacaaatgtaaaaccgactcgaatttatgctcacttttatattccagattcg
cattattttgatggtatgccaacgcgtgaacagtttggttggtactatacgtttctgaat
aaacgacgggaattccatttgagacagcatttgaatgatttagcgaagcataaagggtgg
agtcgtgatatgttaattttcatgacccaggtgttttttgaacttggatttgttacaata
gaaaacggacttgcaaaaattgtagaaggtgctcctaaaaaacaattatcaagtgccaac
gtttataaaacacgcgcacaacaaatggatttggaacagacattgttgtatgcaccatat
aaagatttaagacagtggtttgatgcgagattatccgctcaaacagtttctgaggaggaa
cagtaa
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