Viridibacillus arvi: JNUCC6_08990
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Entry
JNUCC6_08990 CDS
T06874
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
vij
Viridibacillus arvi
Pathway
vij00860
Porphyrin metabolism
vij01100
Metabolic pathways
vij01110
Biosynthesis of secondary metabolites
vij01120
Microbial metabolism in diverse environments
vij01240
Biosynthesis of cofactors
Module
vij_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JNUCC6_08990 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vij04147
]
JNUCC6_08990 (hemB)
Enzymes [BR:
vij01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
JNUCC6_08990 (hemB)
Exosome [BR:
vij04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
JNUCC6_08990 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QOV12865
UniProt:
A0A7M2QXS7
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All DBs
Position
complement(1803005..1803988)
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AA seq
327 aa
AA seq
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MKDLTFKRHRRLRQSATMRSMVKETYLHKEDFIYPIFVMDGENIKNEVSSMPGVFQFSID
RLAEEMDEVVSLGIPSVILFGLPAEKDEVGTQAFHNHGIVQEATRFVKKNYPEIVVIADT
CLCEFTSHGHCGVVNDKEQILNDPSLDLLAKTAVSQAEAGADIIAPSNMMDGFVAAIRKG
LDDAGFEDVPIMSYAVKYASAYYGPFRDAADGAPKFGDRKTYQMDPANRMEAMREATSDV
EEGADFLIVKPALAYLDIVRDVRNNYDLPVVAYNVSGEYAMVKAASINGWIDEKQTVLET
LLGMKRAGADLIITYHAKDAVRWMEGK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttaacatttaaaagacatagacgtttacgtcaatccgctacaatgcgttca
atggtaaaagaaacatatttgcataaagaagatttcatctatcctattttcgtcatggat
ggcgaaaatataaaaaatgaagtatcttcgatgccaggcgttttccaattttcaattgat
cggttagctgaggaaatggatgaagtagtatcactaggtataccttcagttattcttttt
ggcttgcctgcagaaaaagacgaagtaggtactcaagctttccataatcacggtattgtt
caagaagcaactcgttttgtgaaaaagaattacccagaaatcgtggttatagcagacaca
tgtctatgtgaatttacttctcatggtcattgtggggttgtgaatgacaaagaacaaatt
ttaaatgatccttcactagatttattagcaaaaacagcagtttcacaagcagaagcggga
gcagatattattgccccatctaatatgatggacggttttgtagcagcgattcgtaaaggc
ttggatgatgctggatttgaagatgttccaatcatgtcttatgcagtgaaatacgcttca
gcatattacggaccattccgtgatgcggcagatggcgcacctaaatttggtgatcgtaaa
acatatcaaatggatcctgcaaatcgtatggaagcaatgcgtgaagctacttcagatgta
gaagaaggagcagatttcttaatcgttaaaccagcattggcttacttagatattgtacgc
gatgtacgtaataactacgatttacctgttgttgcttacaatgtaagtggagaatatgcg
atggtcaaagcggcatctattaatggctggattgacgagaaacaaacggttttagaaaca
ctactaggtatgaaacgcgcaggagcagacttaatcattacttatcacgcaaaagatgca
gttcgttggatggagggaaaataa
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