Viridibacillus arvi: JNUCC6_09640
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Entry
JNUCC6_09640 CDS
T06874
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vij
Viridibacillus arvi
Pathway
vij03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JNUCC6_09640 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_09640 (mutM)
Enzymes [BR:
vij01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JNUCC6_09640 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JNUCC6_09640 (mutM)
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JNUCC6_09640 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
MatP_C
Motif
Other DBs
NCBI-ProteinID:
QOV12987
UniProt:
A0A7M2QZR9
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Position
complement(1949588..1950460)
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AA seq
290 aa
AA seq
DB search
MPELPEVEGVVRSLQPVVTGKTIHHVTISEVIKQAKEQGKECIIKAVDPDSFQQAIEGMT
IKSIERRSKYIFFHLEKEGNPYLLVNHLGMTGAWFHVSQLSDITEEKFLKHAHVLIQFDD
HNWLVYSDIRRFGEMRFLHELAEHPPLLEMAPEPFSDEALSHFLEKANLTKYANKAVKEV
IMDGHVIAGCGNIYATEALFKMNIHPARKLSRISKERKIELFETIVHILQESIDVGGSTI
SDYRNINGEAGSMQHRLKMYGKKTCPSCNGDTKQKIIGGRNSVYCPNCQH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtagaaggtgtggtgcgttcattacaaccggtggttacaggt
aaaacgattcatcatgtgacgatttcagaggttattaaacaagcgaaagagcaaggtaaa
gaatgtattataaaagcagttgatcctgattcttttcaacaagcgattgaaggaatgact
attaaaagcattgaacgtcgctctaaatatatatttttccacttggagaaagaagggaac
ccatatttgctcgtcaaccatttagggatgacgggcgcatggttccatgtatcgcaactt
agtgatattacagaagagaaatttctaaagcatgcgcatgtattaatccaatttgatgat
cacaactggcttgtctattcggatattcgccgttttggtgaaatgcgctttttacatgag
ctagcagagcatccaccacttcttgaaatggctcctgaacctttttcagatgaagcgcta
tctcattttcttgagaaagcaaatctaacgaagtatgcaaataaggcggttaaagaagtc
attatggatggacatgtgattgcaggttgcgggaatatatatgcaacagaagcgctgttt
aaaatgaatattcatcctgcacgtaaattgtcacgaatcagtaaggaacgtaaaattgaa
ctttttgagacaattgttcatattttacaagaaagtattgatgttggtggttcgaccatt
tcggattaccgaaatattaatggtgaagcgggtagtatgcaacatcgattgaaaatgtat
gggaaaaagacttgtccgtcttgtaatggagatactaaacaaaagataattggtggcaga
aactcagtttattgcccaaattgccaacattaa
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