Viridibacillus arvi: JNUCC6_11315
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Entry
JNUCC6_11315 CDS
T06874
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vij
Viridibacillus arvi
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vij03019
]
JNUCC6_11315 (yhaM)
Messenger RNA biogenesis [BR:
vij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JNUCC6_11315 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QOV09288
LinkDB
All DBs
Position
complement(2278809..2279747)
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AA seq
312 aa
AA seq
DB search
MNGIASLQVGEPVDHYLLIKQATKGVTTMGKPFMTLILQDKSGSIEAKLWDTGEEHEKLY
QSEGIVRVGGEIHDYRGKAQLRIKAIRPVANDEGVSVVDLVPSAETPKEELYEQLMQFFF
EIKNPQISRITRHILKENQDEVMTFPAATKNHHDYASGLLDHVVSMLKLGRAIADLYPTL
NKDLLYAGIILHDIGKVVELSGPVATSYTVTGNMLGHISIMVTEIAKAADTLQIEGEEVM
LLQHMVLSHHGKEEWGSPKKPMLQEAEMLHYIDNIDAKMNMLKRALGKTVPGEFTERLFP
LDNRSFYKPTID
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtatagcatcacttcaagtcggagagccagtcgatcattatttattaattaaa
caagctacaaaaggcgttacaacaatggggaagccatttatgacgcttattttacaagac
aagagcggtagtattgaagcgaaattatgggatacaggcgaagagcatgaaaaactatat
caatctgagggcattgttcgtgtcggtggagaaattcatgattatcgtggtaaagctcaa
ctacgtataaaagcaattcgtccagtagcgaatgatgagggagtttccgtagtagattta
gtaccttctgcagagacgccaaaagaggaattatatgagcaattgatgcagttcttcttc
gaaattaaaaatccacaaatttctcgaattactagacatatattaaaagaaaaccaagat
gaagttatgacgttcccagcagcgacaaaaaatcaccatgattatgcatctggtttactt
gatcacgttgtatcgatgttgaaattaggtcgagcgatagctgatttatatccgacttta
aataaggacttattatatgcaggtattattttacatgatatcggtaaggtagttgaatta
tctggaccagttgcaacatcatatactgtcacaggtaatatgctagggcatatttcgatt
atggtgacagaaattgcgaaagccgcagatacacttcaaatcgaaggtgaagaggtcatg
ttattgcaacatatggtgttatctcatcacggtaaagaagaatggggaagccctaaaaag
ccaatgttgcaagaagcggagatgcttcactacatcgataatatcgatgcaaaaatgaat
atgctaaaacgtgctctaggtaaaacagttccaggggaatttacagaaagactattccca
ttggataatcgttcattttataaaccaacaatagactaa
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