Viridibacillus sp. JNUCC-6: JNUCC6_12445
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Entry
JNUCC6_12445 CDS
T06874
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
vij
Viridibacillus sp. JNUCC-6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_10
Mg_chelatase
AAA_5
PAS_9
HTH_30
AAA_2
AAA
HTH_50
PdtaS_GAF
PAS_4
AAA_3
HTH_22
PAS_8
TrmB
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QOV09472
UniProt:
A0A7M2QQ01
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Position
2528704..2530401
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AA seq
565 aa
AA seq
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MNNEQKLLLKLLSKNFSILNSKELLTSSLQTNPSEQTFFRNDTGEIFIKLDDSQIFCDIF
SFDTPMPTILNACEHNKPLLFTMNDDFIGYTSSTLLLSNLFAEHIKANIFFDTILNTIDE
SCTVIDENQNILYWTKGAEELFTLKERDVLGRPITDFFQAEHLEILNSLQKGTSIQHAQH
QPREDLVVRINSNPVIWQDTIIGAVVSEANITNQIRLNNELYETSEKLFSLEEEVRKVKN
ADNPFTYIKGNSPTLKKTLERVKKAATTHANILINGESGVGKELFAKAIHTIREDDKAPF
IAINCGAIPPGLFESEIFGYEKGAFSGADQKGKKGKVELAKGGTLFLDEIGEMPLDMQVK
ILRLLQEKKFYPVGGTKEIEVDFHVVAATNRDLMDLIKEGKFREDLYYRLNVVNIKIPAL
RERISDIIELTHYFLYEISIKYNRPVHGISQDILQNLMNYSWPGNIRELKNVVERLVVFS
DNGIIKSEDLPIELHVPSITNSKKEESDSLKQFDSLPLNLQLQEYEKDILLKELHKADGN
KNTCAKNLGITRATLYNRLNKLGIK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaacaaaaattacttcttaagctcttatcaaaaaacttttcaatactgaat
tcaaaagaacttttaacttcttcattacaaactaatccctcagaacaaactttttttcgt
aatgatactggggaaatatttattaaattagatgattcacaaatcttttgcgatatcttt
tcttttgatactccgatgccaactattcttaatgcttgtgagcataataagcctttatta
tttactatgaatgatgactttatcggctatacttctagcactctattactttcaaattta
tttgcggagcacataaaagccaatatattttttgatacgattttaaatacgattgatgaa
tcttgcacagttattgatgaaaatcagaacatattatattggacaaaaggagcagaagag
ttatttacgttaaaggaacgtgatgtattaggtcgaccgatcactgattttttccaggct
gaacacctcgaaattctaaattcattgcaaaaagggacatctattcaacacgctcagcat
cagccacgagaagatttagttgtaagaattaactcaaatccagtaatttggcaagatact
attattggggcagttgtctcagaagctaatattacaaatcaaattcgtttaaataatgag
ctttacgagacttcagaaaaattattttctttagaagaagaagtaagaaaagtaaaaaat
gctgataatcccttcacttacataaaaggaaatagccctacactaaaaaagacattagag
agagtaaaaaaggccgctacaacgcatgccaatattttgattaatggtgaaagcggtgtt
ggaaaagagttatttgctaaagctatccacactattagagaagatgataaagctccattt
atagctattaactgcggtgctatcccaccaggactatttgaaagtgaaatctttggttat
gaaaaaggagcattttcaggagcagatcaaaaagggaaaaaaggaaaagtagaacttgca
aagggcggaacattatttttagatgaaatcggtgaaatgccactcgatatgcaggttaaa
atcttacggcttctgcaagaaaagaaattctatcctgttgggggtactaaggaaattgaa
gttgatttccatgttgttgcagctactaatcgtgatcttatggaccttattaaagaagga
aagtttagggaagatttatattatcgcttaaacgtagttaacattaaaattcctgctcta
cgtgaaagaattagcgacataatcgaattaacccattatttcttatatgaaatttctatt
aagtataaccgccctgttcatggtatttctcaagacatactacaaaatctaatgaactac
tcatggccaggaaatattcgagaactaaaaaacgtcgttgaaagacttgttgtattctct
gataacggaatcataaaatctgaagacttaccaattgaattacatgttccctctattacc
aatagtaaaaaagaggaaagcgattctttgaaacaattcgattcccttcccttgaatctc
caattgcaggaatacgaaaaagatatattacttaaagagttacataaagccgatgggaat
aaaaatacatgtgcaaaaaatcttggtatcacccgcgctacactttacaaccgtctaaat
aaattaggcataaaataa
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