Viridibacillus sp. JNUCC-6: JNUCC6_14130
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Entry
JNUCC6_14130 CDS
T06874
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JNUCC6_14130 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vij01007
]
JNUCC6_14130 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vij03016
]
JNUCC6_14130 (lysS)
Enzymes [BR:
vij01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JNUCC6_14130 (lysS)
Amino acid related enzymes [BR:
vij01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JNUCC6_14130 (lysS)
Transfer RNA biogenesis [BR:
vij03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JNUCC6_14130 (lysS)
Prokaryotic type
Other AARSs
JNUCC6_14130 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
GCR1_C
Crust_neurohorm
Motif
Other DBs
NCBI-ProteinID:
QOV09745
UniProt:
A0A7M2QNZ0
LinkDB
All DBs
Position
complement(2854578..2856062)
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AA seq
494 aa
AA seq
DB search
MSEELNDQILVRRQKMASIRENGLDPFGARFERTHLSNEIKEQYVDFTKEQLEEDLHEVV
IAGRIMTKRGKGKAGFAHIQDLGGQVQIYVRKDAIGEEAYELFKQADLGDIVGIRGNVFR
TQVGELSVKALEFTFLTKSLRPMPEKFHGLKDVEQRYRQRYLDLMTSEESKQTFITRSKI
IQAIRRYLDGNGYLEVETPMLHTIAGGAAARPFITHHNSLDMELYMRIAIELHLKRLIVG
GLEKVYEIGRVFRNEGMSTRHNPEFTMIELYEAYADYRDIMALTENLISHVAQEVLGTTD
VQYGDDVISLAPGWTRLHMVDAVKEATGVDFWAPMSKEEARAHAKEHGVEIKDSMEVGHI
INEFFEQKIEETLVQPTFIYGHPVEISPLAKKNPEDERFTDRFELFIVRREHANAFTELN
DPIDQRERFEAQLAEKEAGNDEAHEMDDDFIEALEYGMPPTGGLGIGIDRLIMLLTNSQT
IRDVLLFPTMRPRD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgaagaattaaatgaccaaattttggtgagacgccaaaagatggcttctattaga
gaaaacggcttagatccattcggtgcccgttttgaacgtacgcatttatcaaacgaaatt
aaagaacagtatgtggattttactaaagaacaattagaagaagatttacatgaagttgta
atcgcgggtcgtattatgacaaaacgcggtaaaggtaaagctggtttcgcgcatattcaa
gatttaggtggacaagtacaaatttatgttcgaaaagatgctattggtgaagaagcatac
gaattgtttaagcaagcagacctaggagacatcgtaggtattcgcggtaatgttttccgc
actcaggtaggagaactttctgttaaagcattagaatttactttcctaactaaatcatta
cgcccaatgccagagaaattccatggcttaaaagatgtagagcaacgttatcgtcaacgt
tacttagatttaatgacaagtgaagaaagtaaacaaactttcattactcgctcaaaaatt
attcaggccatccgccgttacttagatggcaatggttaccttgaagtagaaacaccaatg
ctacacacaattgcgggtggagcagcagctcgtccattcattacgcatcataattcatta
gatatggaattatatatgcgtatcgctattgaactacacctaaagcgattaatcgttggt
gggcttgaaaaagtatatgaaatcggtcgtgtattccgtaatgaaggtatgtcaacgcgc
cataacccagaattcactatgattgaattatacgaagcatacgctgactaccgtgatatc
atggctcttacagagaatttaatatctcacgtagcacaagaagttttaggtacaactgat
gttcaatatggcgatgatgttataagtttagcgccgggttggactcgtctgcacatggta
gatgcagttaaagaagcaacgggtgtagacttctgggctccgatgtcaaaagaagaagcg
cgagcacatgcaaaagaacacggtgttgaaattaaagactctatggaagtaggtcatatt
attaatgaattcttcgaacaaaaaatagaagaaacattagttcagcctacatttatctat
ggtcatccagtggaaatttctccattagctaagaagaaccctgaagacgagcgattcaca
gatcgttttgaattattcattgtacgtcgtgagcatgcaaatgcctttactgaattaaat
gatccaattgatcaacgtgaacgctttgaagcacagcttgctgaaaaagaagcaggtaat
gatgaagcgcacgaaatggatgatgacttcattgaagcattagaatatggtatgccgcca
acaggtggattaggtatcggtatcgatcgcttaatcatgttgttaacgaattcacaaact
atacgtgatgtattattattccctacaatgcgtccgcgtgattaa
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