Viridibacillus arvi: JNUCC6_15555
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Entry
JNUCC6_15555 CDS
T06874
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vij
Viridibacillus arvi
Pathway
vij03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JNUCC6_15555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vij03021
]
JNUCC6_15555
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_15555
Enzymes [BR:
vij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JNUCC6_15555
Transcription machinery [BR:
vij03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JNUCC6_15555
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JNUCC6_15555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SpoIVA_ATPase
PASTA
Motif
Other DBs
NCBI-ProteinID:
QOV10007
UniProt:
A0A7M2QR37
LinkDB
All DBs
Position
3131633..3132577
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVASIILNIKKLALKIYSDEEKVIEIDFKGDGVVTAADITHDSDVEV
LNPDLYIATIAKNGHLRMRMYAQRGRGYTPADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQSSDFDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
AKLEELGLGLREED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaagattgaaaccgttgagatcagcgatgatgccaaatac
ggcaagtttgttgtagaaccacttgaacgtggatatggaaacactttgggaaattcttta
cgtcgtatccttctgtcttctttaccaggagctgctgttacttcaatccaaattgacggc
gtactacacgaattctctactattgagggcgttgtagaagatgttgcatcaattattttg
aacattaaaaagctagctttaaaaatctattctgatgaagaaaaagtcattgaaatagat
ttcaaaggtgacggagtagtaactgctgcggatattacgcatgacagtgacgttgaagtg
ttaaacccagatctatatattgcaactattgctaaaaatggtcatcttcgtatgcgtatg
tatgcgcaacgtggacgtggttacactcctgctgatcaaaacaaacgcgaggatcttcca
attggcgtgatcccgatcgactctatttacactccagtttcacgcgtcaacttccaagta
gaaaatactcgtgttggacaatcgtctgatttcgataaactttctctagatgtatggaca
gatggtagcatcggtcctaaagaggcgatttcgctcggagcaaaaatattaaccgagcac
ttaaatatcttcgttggtttaacagacgaggcacaaactgctgaaatcatggttgaaaaa
gaagaagaccaaaaagaaaaagtcttagagatgactatcgaagagcttgatctttctgtg
cgttcttacaactgtttaaaacgagcaggtatcaacactgttcttgaacttgctaacaag
tctgaggacgacatgatgaaagttcgtaacctaggacgtaaatcattagaagaagtaaaa
gcgaagttagaagagcttggtttagggttacgcgaagaagactaa
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