Viridibacillus arvi: JNUCC6_17245
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Entry
JNUCC6_17245 CDS
T06874
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vij
Viridibacillus arvi
Pathway
vij03420
Nucleotide excision repair
vij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JNUCC6_17245
03430 Mismatch repair
JNUCC6_17245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_17245
Enzymes [BR:
vij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNUCC6_17245
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNUCC6_17245
MMR (mismatch excision repair)
Other MMR factors
JNUCC6_17245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
PABC_AtC3H46
Motif
Other DBs
NCBI-ProteinID:
QOV13487
UniProt:
A0A7M2R1F0
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All DBs
Position
3486884..3489049
Genome browser
AA seq
721 aa
AA seq
DB search
MNFFDKMQQHTGVSLNDVQKQAVRYSDGPLLLLASPGSGKTTTLNMKIGYLLLVKKIPAK
AILAITFSKASAQDMAQRFDQFFGKLTHEKVHFSTIHSFAFQVVREYFAKQRITFQLVEG
GNDVPLHKKIILRNIFTEIKDTNPTEDEMDELLTYISYVKNRMLSNKQLSTVKSSISGIG
DMYKAYEQFKAQNPQHPLLDFDDMLTYCLRILQEDEQIRTKYQRRFEYILTDESQDNSVI
QHEIITILAKPQNNLCVVADDDQSIFMWRGSDVQKLLEFEKNYPQAKILTMTQNYRSTPE
IVKTANDFIKRNPKRYTKEMFTENQSGESIEIHNMQRYELQLNYVIQEIENRSNPQETAI
LYRNNSSAIRLVDKLNKAGLPFYMKDVDLKFFRHWIVEDIINFMRLSYNDSRVDILEKVH
TKMNAYITKKQMMYLKNNNDKTSVFDQLQTVRHADYQEQALNKTKKLIKKINILDPEEAI
KIIRKNLGYEKSIRNTAEHLGFNEEGLLGVLNQLEHIAIGLPNLEAFAKRLKELEEIMKT
SWSNKGRDVVTLSTLHSAKGLEYDTVYMIDLVDGIIPSKDDLKQQDEGNSEPIEEAVRLF
YVGMTRARKHLELLTYHLKDDEHVEESQFLKQVRRLVKGKELVKKEVGYRESKPARDVPV
NAITKKEDLQLNSYVEHHVFGKGEIKELSGQAIGVAFESVGYKKFMIDICLKQGFLCNIE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctttgataaaatgcaacaacatacgggtgtttctttaaatgacgtacaaaaa
caggcagttcgatattctgatggtccattgctattgttagcatcacctggttcaggaaag
acgacgactttgaatatgaaaattggctatctattattagtgaagaaaataccagcaaaa
gcgatcttagccattacatttagtaaagcctctgcacaagatatggcacagcgcttcgac
caattctttggcaaacttacgcatgaaaaggttcatttctctacaattcatagctttgct
tttcaagtagtacgagaatactttgcaaagcaacgcataacttttcaactagtagaaggg
ggtaacgacgtcccacttcataaaaaaataattcttcgaaatatattcacggagataaag
gatacaaatccaactgaagatgaaatggatgagctccttacctatataagctatgtaaag
aatcgtatgctttcaaataagcagctaagtaccgtgaaatcctctatctcaggtataggc
gatatgtataaagcgtatgaacaattcaaagcgcaaaacccgcaacatccactcctggat
tttgatgatatgctcacgtactgcttacgtattttacaagaggatgagcaaattcgtacg
aaatatcagcgccgctttgaatacattttaacggatgagagtcaggataattccgtaata
cagcatgaaattatcacgatattagccaaaccacaaaacaatctttgcgttgtagctgat
gatgatcaatctattttcatgtggcgtggatcggatgtccaaaagttattagagtttgaa
aagaattatccacaagctaagattttaacaatgactcaaaactatcgctccacaccagag
atcgtgaaaacagcaaatgacttcatcaaacgaaacccaaagcgctatacgaaggaaatg
ttcacagaaaatcaatctggtgaatcaattgaaatccacaatatgcagcgctatgagtta
caactgaactacgtcattcaagaaattgagaatagaagtaatccgcaagaaacggccatt
ttataccgtaataattcttcagccatccgattagtggataagttaaataaagcaggtttg
ccattctatatgaaagacgtagatttgaaatttttccgtcattggattgtagaagatatt
atcaattttatgcgcctttcctataatgattcacgtgtagacattcttgagaaagtgcat
acgaaaatgaatgcttacattacgaaaaaacaaatgatgtatttaaagaacaataatgac
aaaacttcagtttttgatcagcttcaaacggtccgacacgcagattatcaggagcaggca
ttgaataaaacgaagaagttaattaaaaagataaatatactagatccagaagaagcgatt
aaaatcatccgtaaaaatctaggctatgaaaaatcgatacgtaacacggctgagcacctt
ggctttaatgaggaaggattattaggtgttctaaatcaactagagcatattgcgattggt
ctaccaaatcttgaggcattcgcaaaacgcttaaaggaattagaagaaattatgaaaacg
tcttggtcaaacaaagggcgtgatgtagttactttatctactttgcatagtgcaaaggga
cttgagtatgataccgtgtatatgattgatctagttgatggcattattccttcaaaagat
gatttaaaacaacaggacgagggtaatagcgaaccgatagaagaagcagttcgtctcttc
tacgtagggatgactcgtgcacgtaagcatttggagttgcttacttaccacttaaaagat
gatgaacatgtagaggagtctcagttcttaaaacaagtacgccgtttagtaaaaggtaag
gaattagtgaaaaaggaagttggttatcgagaaagtaaacctgctcgagatgttcccgta
aatgccattactaaaaaagaagatttgcagttgaatagctatgtagagcatcatgtgttt
ggtaaaggtgaaataaaagagctaagtggacaagcaattggtgttgcatttgaatctgta
ggttataagaaatttatgatcgatatatgtttaaaacaaggatttctttgtaatatagag
gaatag
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