Viridibacillus sp. JNUCC-6: JNUCC6_17365
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Entry
JNUCC6_17365 CDS
T06874
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij00550
Peptidoglycan biosynthesis
vij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JNUCC6_17365
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vij01003
]
JNUCC6_17365
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vij01011
]
JNUCC6_17365
Enzymes [BR:
vij01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JNUCC6_17365
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JNUCC6_17365
Glycosyltransferases [BR:
vij01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JNUCC6_17365
Peptidoglycan biosynthesis and degradation proteins [BR:
vij01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JNUCC6_17365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QOV10336
UniProt:
A0A7M2QR28
LinkDB
All DBs
Position
complement(3507034..3509088)
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AA seq
684 aa
AA seq
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MNRADYWRKRRVNKRWKRTLMWSVVGISAFLTVLLSLRIYAQIAGAPSLAVPKATVFLDA
DGHRAGDKFSMERRYWVNLDEISPFVAQALIATEDKNFYSHNGFDYTRIAGALLKDIKAM
RKVEGASTITQQYARNLYLSHEKSWLRKANEALYAYRLEVFYDKDKILEGYLNTVYFGHG
MYGIEAASRFYFGKSAKDLTLSEAALLVGIPKGPGIYSPAVNKEKSIGRQQLILSLMSNQ
SVISEEQAERAKSETLDFKYEEWENSKSLAPYFLDTAWQEAKDILTEKGRRFEEGGWVIK
TTLNTSHQKAAEEAVEKSLPNDELEVGFVSMDPSTGYVTALVGGRHYLTSTFNRVTQAKR
QPGSAIKPFLYSAALEKGYTPLTFMDTSPTIFTYDDGRSKYEPKNVNGEFADHPMSLAQA
IAISDNIYAVKTFETIGYKAFSNVLNRFNIQSKLQNSPAVALGTSEVSLMNLTSAYNTLA
AKGVQKKPTTIISITDANGKVIYKAEKKQKQKQVISSDDAFLITQLMTGMFDPVFNDYAP
ATGISIRNKQTRPYAAKSGTTLTDQMMVGFTPSLTAGVWNGYDKGKQMDSAEDSRATKQI
WIDFMEKAHEGLPSEPFMAPDNIEGVIVDVKTGGLATSSCDQQRLVYMKKKDIPKKLCTD
PSIVSDLTKKDETSWHLFPFSLFE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagcagactattggcgaaaaagaagggtgaataagcgctggaaacgcactctt
atgtggagtgtcgtaggtatttcagcttttttaacagtattgctgtcactcagaatatac
gcacaaattgcgggtgcgccttctctcgctgttccgaaggcaaccgtttttttagatgcg
gatgggcatcgagctggcgataaattttctatggaacgtcgctactgggtaaacctagat
gaaatttctccttttgttgcacaagcacttattgcaacggaagataaaaatttctattcg
cataacggttttgattacacccgtattgcaggtgcattattgaaagatattaaggcaatg
cgcaaagttgaaggagcgagtacaattacgcagcaatatgctcgcaatttatatttatcg
catgagaaatcgtggctaaggaaagcaaatgaagcactctatgcataccgtttggaagtc
ttttatgataaggataagattttagaaggctacttaaatactgtttactttggacatggt
atgtacggtattgaagctgcaagtagattttattttgggaaatcagcaaaagatttaaca
ctttctgaagctgctttgctagttgggattccaaaaggaccaggcatttattctcctgca
gtaaataaagaaaaatcaataggtcgtcaacaattaatattaagtttaatgtctaaccaa
agtgttatttctgaagaacaagcagagagagctaagagcgaaactctagattttaaatat
gaggaatgggaaaattcgaaatcactagcaccatactttttagatacagcttggcaggaa
gcaaaagatatcctgactgagaaaggccgtcgctttgaagaaggtggttgggtaatcaaa
acaacattaaatacttcccatcaaaaagctgctgaagaagctgtagagaaatcgttacca
aacgatgaactagaagttggtttcgttagtatggatccatctacaggttatgttactgct
ctagttggaggacgacactatttaacaagtacattcaatagggtaacacaagctaaaagg
cagcctggatctgctattaagccatttttgtatagtgctgcactggaaaaaggttatact
cctttaacgtttatggatactagccctaccattttcacttacgatgatggacgctctaaa
tacgagcccaaaaatgtaaatggcgaatttgcggatcatccaatgtctttggcacaagca
attgctatatcggataatatctacgcagtgaagacgtttgaaactatcggctataaggca
ttcagtaatgtattgaatcgatttaacatccaaagtaaattgcaaaattcaccagcggta
gctcttggtacttctgaagtaagcttaatgaatttaacttccgcttataacacattagcg
gcaaaaggtgttcaaaagaaaccaacaacaattatttcaattactgatgcaaatggaaaa
gttatttataaagcagaaaagaaacagaaacagaaacaagtgattagttcagatgatgcg
tttttaatcacacagttgatgactggtatgttcgatccagtctttaatgattatgcacca
gcaactgggatttcaattcgtaacaaacaaactagaccttatgcagcaaaatcaggtaca
actttaaccgatcaaatgatggttggttttaccccttctttaactgctggtgtttggaat
ggttacgataaaggcaaacagatggacagtgcagaagattcacgagctacaaaacaaatt
tggattgattttatggaaaaagcacatgaaggattacctagtgagccatttatggcgccc
gataatattgaaggcgtaattgtcgatgtaaaaacaggtggtctagcgacttcaagttgt
gatcaacaacgacttgtatatatgaaaaagaaagatatcccgaaaaagctatgtacagat
ccaagtattgttagtgatttaacgaaaaaagacgaaacatcttggcatctatttcctttt
tcattatttgaataa
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