KEGG   Viridibacillus arvi: JNUCC6_18425
Entry
JNUCC6_18425      CDS       T06874                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
vij  Viridibacillus arvi
Pathway
vij03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vij00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    JNUCC6_18425 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vij03400]
    JNUCC6_18425 (uvrB)
DNA repair and recombination proteins [BR:vij03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JNUCC6_18425 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      JNUCC6_18425 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD TrwB_AAD_bind AAA_30 AAA_16 AAA_19 DUF3071 AAA_22 UB2H P-loop_SecA AAA_7 PMT2_N HEM4 AAA AAA_25
Other DBs
NCBI-ProteinID: QOV10535
LinkDB
Position
3750745..3752727
AA seq 660 aa
MVQAFDLHSPYKPNGDQPAAIAELVEGVRQGKQHQTLLGATGTGKTFTISNVIKEVKKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINDEID
KLRHSATSSLFEREDVIVIASVSCIYGLGSPEEYREMVLSIRTGMEIERNQLLRKLVDIQ
YERNDINFTRGTFRVRGDVVEIFPVSRDERCLRVEFFGDEVERIREVDALTGEIIGEREH
VAIFPASHFVTREEKMVKAIENIKDELKEQLEKLREEDKLLEAQRLEQRTNYDLEMMSEV
GFCSGVENYSRHLTLRPAGATPYTLLDYFPEDFLLVVDESHVTLPQIRGMYNGDQARKGV
LVDHGFRLPSALDNRPLKFEEFEKHVHNAIFVSATPGPYELEHTPDMVEQIIRPTGLLDP
EIEVRPIEGQIDDLIHEINLRTEKNERVLITTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERIEIIRELRMGVYDVLIGINLLREGIDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNSNGHVIMYADRMTDSMTKAIDETYRRRTIQAAYNEEHGITPRTIQKEIRDVIRATQ
AAEEQETYVTKVLKGKKLTKQERETLLLSLEKEMKDAAKALDFERAAELRDTILELKAEG
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggttcaggcatttgatttacattcaccatacaagccaaatggcgatcagccagctgca
atagcagagcttgtcgaaggtgttcgtcaaggtaaacaacaccaaaccttactaggagca
actggtacaggtaaaacatttacaatttccaatgtaataaaagaagtcaaaaagccgact
cttgttattgcgcataataagacactcgcgggtcaattatatagtgaatttaaagaattc
tttccaaataatgcagtagaatatttcgtcagctattatgactactatcagccagaagct
tatgtaccacaaaccgatacatatatcgagaaggactctagtattaatgatgaaattgat
aagctacgccattcagcaacatcttcattatttgaaagagaagatgtcatcgtcatagcg
tctgtttcttgcatttatggcctcggttcaccagaagaatatcgagaaatggtgttatcc
atccgaacagggatggaaatcgaaaggaatcaattgttacgtaaacttgtagatattcag
tatgaacgtaatgatattaatttcacccgcggaacatttagagtacgcggagatgttgtc
gaaattttcccagtatctcgagatgagagatgcttacgtgtagaatttttcggtgatgaa
gtagagcgtattcgtgaagtcgatgcgttaacaggagaaattataggcgaacgtgaacat
gtcgctatattcccagcatcccacttcgttacgcgagaagaaaaaatggtcaaagccatt
gagaatattaaagatgaattgaaggaacaacttgagaaacttcgtgaggaagataaatta
ctagaggcacaacgcttagaacaaagaacaaattatgatttagaaatgatgagcgaagtc
ggcttctgttcaggtgtagaaaactattctcgtcatttaacgctaagaccagcaggtgca
acaccttacacattattagattacttcccagaggactttttactagtggtagatgaaagt
catgttacattaccacaaatccggggaatgtataacggtgaccaagcacgcaaaggtgtt
ttagttgatcatggattccgtttaccatcagcacttgataatagaccgttaaaatttgaa
gaatttgagaaacatgttcataacgcgatttttgtttctgctacaccaggaccttatgaa
ttggaacatacacctgacatggtggagcaaattattcgtccaacgggtctacttgatcct
gagattgaagtacgaccaattgaaggtcaaatcgatgatttaatccatgaaatcaattta
cggactgaaaaaaatgagcgtgtattaattacaacattaacgaaaaaaatgtcagaagat
ttaactgattatttaaaagaaatcgggattaaagtacagtacttacactcagaagttaaa
acattagagagaatagaaatcattcgtgaattacgtatgggagtgtacgacgtattaatc
ggtattaacttactacgcgaaggtatcgatattccagaagtatctttagttgctatactg
gatgcagataaggaagggttcctacgttcagagcgttcgcttatccaaacaattggacgt
gcagcgcgtaattcgaacggtcacgttattatgtatgcagaccgtatgacggattcgatg
acaaaagcaatcgacgaaacatatcgtcgtcgtacaattcaagctgcctacaatgaagag
catgggattacgccaagaaccattcagaaagaaattcgcgatgtaattcgggcaacacag
gcagcggaagaacaagaaacatatgtaacgaaagtattgaaaggtaaaaagctaacaaag
caagaaagagaaacacttttactttcattagaaaaagaaatgaaggatgcagcaaaagcg
ctcgacttcgaacgtgctgcagagcttcgtgatacaatcctggaactgaaagcggaagga
tga

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