Viridibacillus sp. JNUCC-6: JNUCC6_19885
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Entry
JNUCC6_19885 CDS
T06874
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
vij
Viridibacillus sp. JNUCC-6
Pathway
vij00020
Citrate cycle (TCA cycle)
vij00640
Propanoate metabolism
vij00660
C5-Branched dibasic acid metabolism
vij00720
Other carbon fixation pathways
vij01100
Metabolic pathways
vij01110
Biosynthesis of secondary metabolites
vij01120
Microbial metabolism in diverse environments
vij01200
Carbon metabolism
Module
vij_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vij_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JNUCC6_19885 (sucD)
00640 Propanoate metabolism
JNUCC6_19885 (sucD)
00660 C5-Branched dibasic acid metabolism
JNUCC6_19885 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
JNUCC6_19885 (sucD)
Enzymes [BR:
vij01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JNUCC6_19885 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QOV10803
UniProt:
A0A7M2QS47
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All DBs
Position
4062123..4063025
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AA seq
300 aa
AA seq
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MSVYINKETKVLVQGITGSTALFHTKQMLEYGTKVVAGVTPGKGGTTVEGVPVFNTVVDA
VEATGCNVSVIYVPAPFAADAILEAVDADLDLVICITEHIPVLDMVKVKRYMEGKKTRLI
GPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSQEGIGQTTAVGIGG
DPVNGTNFIDVLKEFNEDPETYGVVMIGEIGGTAEEEAAEWIKANMTKPVVGFIGGQTAP
PGKRMGHAGAIISGGKGTAADKIKAMNAAGIQVAETPSVIGETFIKVIKEHGLYEKCKTH
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtttatattaataaagaaactaaagtacttgtacaagggattacagggtcaacg
gctctattccatacaaagcaaatgctagaatatggtacaaaagttgtagcaggagttacg
cctggtaaaggtggtacaactgtagaaggtgtacctgtttttaacacggtggttgatgct
gttgaagcaacaggctgtaatgtttctgtcatctacgtaccagcaccatttgcggcagac
gctatattagaagctgttgatgctgatttagatttagttatttgtatcactgagcatatc
ccggtattagatatggttaaagtgaaacgttatatggaaggtaagaaaacacgtctaatt
ggtccgaactgtccaggtgttattactgcagatgaatgtaaaattggtattatgccaggt
tatatccataaaaaaggccatgtaggagtagtatcacgctcaggtactttaacttatgaa
gcagttcatcaactttctcaagagggtattggtcaaacgactgctgttgggattggtgga
gacccggttaatggtacaaacttcattgatgttttaaaagaattcaatgaagatcctgaa
acttatggtgttgttatgattggtgagattggcggtacagctgaagaagaagcagctgag
tggattaaagcgaatatgacaaaaccagttgtaggcttcattggtggacaaactgcacct
ccagggaaacgtatgggccatgctggtgccattatttcaggtggtaaaggcacagctgct
gacaaaattaaagcgatgaatgcagctggtatccaagtagcagaaacaccatctgttatc
ggtgaaacatttattaaagttattaaagaacatggtttatacgaaaaatgtaaaacccat
taa
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