Viridibacillus arvi: JNUCC6_20185
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Entry
JNUCC6_20185 CDS
T06874
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vij
Viridibacillus arvi
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vij03016
]
JNUCC6_20185 (truB)
Enzymes [BR:
vij01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JNUCC6_20185 (truB)
Transfer RNA biogenesis [BR:
vij03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JNUCC6_20185 (truB)
Prokaryotic type
JNUCC6_20185 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QOV10860
LinkDB
All DBs
Position
4119835..4120749
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AA seq
304 aa
AA seq
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MQHGILPLWKERGMTSHDCVFKLRKILQTKKVGHTGTLDPGVEGVLPICIGNATRLAEYL
TDAGKTYEAVISIGTSTTTEDAEGEIVAEDSSVKTISREQLLQVLANLTGEISQTPPMYS
AVKVNGRKLYEYARQGQIIERPSRNVMIYSLELLDDELVYEGATITFPVRIACSKGTYIR
TLAVQIGEELGYPAHMASLVRTASGNFKKEDCVTISELREIAEAGELDKVIMPIEQALTN
YPTFQINEENHKQITNGQVLPMHSSLQEHDKIVFVESGRAVAIYIKHPTKDGLMKPEKMF
PAVD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatggcattcttcctctatggaaagaacggggaatgacttctcacgattgcgta
tttaaattacgcaaaatattgcaaacgaaaaaagtaggacatacagggacgctagaccca
ggtgtagaaggtgtcttgccgatttgtattggcaatgcaacacgcctagcagaatatttg
acagacgcaggtaaaacgtatgaggccgttatttcaattggtacttctactacaactgaa
gatgctgaaggggaaatagtggcagaagatagtagtgtcaaaaccatttctcgtgaacaa
ttattacaggtacttgctaatcttactggagaaatttcacaaacaccaccgatgtattca
gctgtgaaagtaaatggacggaaattatatgaatacgcacgccaaggtcagattatagaa
cgtccatctcgtaatgtaatgatttatagcttagaactactagatgatgaattggtttat
gagggagctactatcactttcccagttcgcattgcatgtagcaaagggacatatattcgc
actttagctgtacaaataggtgaagagttagggtaccctgcgcatatggcttcactagtt
cgtacagcttctgggaatttcaagaaggaagattgtgtcacaatttctgaattacgtgaa
attgctgaggcgggggaattggataaagtaataatgccaattgagcaagcattaactaat
tatccaactttccaaattaatgaagagaatcataagcaaattacaaatggacaagtactt
cctatgcactcatctctacaagaacatgataaaatagtatttgtagaaagtgggagagcg
gttgctatttatattaagcatccaacaaaagatgggcttatgaagccagaaaaaatgttc
ccagctgttgattag
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