Viridibacillus arvi: JNUCC6_20200
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Entry
JNUCC6_20200 CDS
T06874
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vij
Viridibacillus arvi
Pathway
vij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JNUCC6_20200 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vij03019
]
JNUCC6_20200 (pnp)
03016 Transfer RNA biogenesis [BR:
vij03016
]
JNUCC6_20200 (pnp)
Enzymes [BR:
vij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JNUCC6_20200 (pnp)
Messenger RNA biogenesis [BR:
vij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JNUCC6_20200 (pnp)
Transfer RNA biogenesis [BR:
vij03016
]
Prokaryotic type
tRNA degradation factors
JNUCC6_20200 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
SPATA25
KH_2
Motif
Other DBs
NCBI-ProteinID:
QOV10862
UniProt:
A0A7M2QU50
LinkDB
All DBs
Position
4122304..4124415
Genome browser
AA seq
703 aa
AA seq
DB search
MNEKKVYTYEWAGRPLQIEVGQLAKQANGSVLVRYGETVVLSNATASKHPKPLDFFPLTV
NYEEKLYAVGKIPGGFIKREGRPSEKAVLTSRLIDRPIRPLFPDGFRNEVQVISMVMSAD
QDCPSEMAAMLGSSLALMVSDIPFDGPIAGVQVGLVDDEFIVNPTVAQWEKSTINLIVAG
TKDAINMVEAGALEVPEEKMLEAIMFGHEEIKKIIAFQETIAAEVGKEKMEVILHGINEE
LFAEINAEFGTNMVAAIQTYEKHAREEAINAVKAEVIAKYEEAEADEATLKQVGEILDKM
VKEEVRRLITEDKIRPDGRKLDEIRPLSSEVGLLPRAHGSGLFTRGQTQALSVCTLGALG
DVQIIDGLGVEESKRFMHHYNFPQFSVGETGPIRGPGRREIGHGALGERALEAVIPNEKD
FPYTIRCVSEVLESNGSTSQASICASTLAMMDAGVPLKAPVAGIAMGLIKKDEHYSILTD
IQGMEDHLGDMDFKVAGTSKGVTALQMDIKIDGLSNQILEEALTQAKIGRMHILESMLAT
MPERRDRLSKYAPKIIMVKINPDKIRDVIGPGGKQINKIIEETGVKIDTEQDGTIYISSV
DEEMNARAKEIIENIVREAVVGEYYMGKVKRIEKFGAFVQIFPGKDGLLHISEIQEERTK
AVEDVLKLEDELLVKVIEIDNQGRVNLSRKVVLKEEKERAEQK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaaaaggtttatacctatgaatgggccggacgacctttacaaatcgaagta
ggtcagctcgcaaagcaagctaatggatcggtattagtacgttatggagaaacagttgta
ctttcaaatgcaacagcttcaaaacacccaaaaccattagacttcttcccattaacagtt
aactatgaagaaaaattatatgcagttggtaagatccctggagggtttatcaaacgtgaa
ggacgtccttctgaaaaagcggtattaacatctcgtttaatcgaccgtccaatccgtcca
ttattcccagatggcttccgtaatgaagtacaagtaatctctatggttatgtctgcagat
caagattgcccttcagaaatggcagctatgcttggatcatcacttgcactaatggtttct
gatattccatttgacggaccaatcgcaggtgtccaagttgggcttgtagacgatgaattt
atcgtaaacccaacagttgcacaatgggaaaaatcaacaattaatttaatagttgctggt
acaaaagatgctattaacatggttgaagcaggcgctttagaagttcctgaagaaaaaatg
ttagaagctattatgttcggtcacgaagaaattaaaaaaataattgctttccaagaaaca
attgctgctgaagtcggcaaagaaaaaatggaagtaatattacatggtataaatgaagaa
ttatttgctgaaattaacgcagaattcggaactaatatggttgctgctatccaaacttat
gaaaagcatgctcgtgaagaagcaattaatgctgtaaaagctgaagttattgctaaatac
gaagaagctgaagcagatgaagcaactttaaaacaagttggcgaaattctagataaaatg
gtgaaagaagaagtacgccgtttaatcacagaagataaaattcgtccagatggtcgtaaa
ttagatgaaattcgtcctctatcttcagaagtaggtttacttccaagagcacatggctct
ggtttgttcacacgtggacaaactcaagcactttcagtttgtactttaggtgcactaggt
gatgttcaaattattgatggtttaggtgttgaagagtctaaacgcttcatgcatcattat
aatttccctcaattctcagtaggggaaactggacctattcgtggaccaggtcgtcgtgaa
atcggacacggtgctttaggagaacgtgctttagaagcagttattccaaatgaaaaagac
ttcccttacacgatccgttgcgtatcagaagttttagaatcgaacggttctacttcacaa
gcaagtatttgcgcttcaactctagcaatgatggatgcaggtgttcctcttaaagcacca
gtagcaggtattgcgatgggtcttattaaaaaagatgaacattattcaattttaactgat
attcaaggaatggaagatcaccttggtgatatggacttcaaagtagcaggtacttcaaaa
ggtgttactgcacttcaaatggatatcaaaattgatggtctatctaaccaaattttagaa
gaagcgttaacacaagctaaaattggtcgtatgcatatactagagtctatgcttgcaact
atgccagaaagacgtgatcgcctatcaaaatatgctccgaaaattatcatggttaaaatt
aacccagataaaattcgcgacgtgatcggacctggtggtaaacaaatcaataaaattatc
gaagaaactggcgtgaaaattgatacagaacaagacggtacaatttacatctcttcagtt
gacgaagaaatgaacgcacgtgcaaaagaaatcattgaaaacattgtacgtgaagcagtt
gtaggcgaatattacatgggtaaagtaaaacgtatcgaaaaattcggtgcatttgttcaa
atcttcccaggtaaagacggtttactacacatttctgaaattcaagaagagcgcactaaa
gcggtagaagatgttcttaaattagaagatgaactacttgtaaaagtcattgaaatcgac
aaccaaggtcgtgtaaacctttctcgtaaagtagtattaaaagaagaaaaagaacgcgca
gagcaaaagtaa
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