Viridibacillus arvi: JNUCC6_20355
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Entry
JNUCC6_20355 CDS
T06874
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
vij
Viridibacillus arvi
Pathway
vij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JNUCC6_20355 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_20355 (mutS)
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JNUCC6_20355 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_29
NarE
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QOV10892
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Position
4158360..4160990
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AA seq
876 aa
AA seq
DB search
MTTYTPMIQQYLQVKADYKDAFLFFRLGDFYEMFFDDAIKASQILEITLTSRDAGMKERI
PMCGVPHHSAKNYIETLVQKGYKVAVCEQTEDVKQAKGVVKREVVQLITPGTIMEGKALD
GKTNHFIAAAEQINTSEYAFCYLDLSTGEATVTYVEGDGLVLLQQLQSFGIREMVVSEQL
FAELTEQAEALSIVLSIEEEVMDESKSAQYLEEAPSNLHGAGRKLLHYIERTQMRSLSHI
QPFQYNENKNYLNIDTNSKRNLELIQSLRGGDQKGTLLWLLDETVTAMGGRKLKQWLHQP
LANRQHIENRLSIVTDLLEEYFVRAELQELFKQVYDLERLAGRVAFGNVGGRDLAQLRES
LRQVPVIQEQLQNSSKANLQNLGNALDLCSDVESYLSHAITDHPPISIKEGDVIRGGYDA
KLDELRYASRNGKDWIAALEKQEREKTGIKNLKIGYNRVFGYYIEITKSYIHLADLERYE
RKQTLANAERYITDELKEKEAIILNAEEESLALEYTLFTQIREELKQYIPRLQALASAIS
ELDVYVGFATVTEKYRFTKPVFHEGRSLKIVNGRHPVVEKMMNQQLYVPNDCILTDDRNM
MLITGPNMSGKSTYMRQVALITILAQMGCYVPADEAELPITDQIFTRIGAADDLAAGQST
FMVEMLESQHAITNATEKSLLLFDEIGRGTSTYDGMALAQSMMEYIHNKIGANTLFSTHY
HELTDLENDLNRLQNVHVSAMEQDGKVVFLHKVKKGPADKSYGIHVAELAELPADIISRA
RILLEEFETTNAVSAATVTKAEATPIVKDEAVAIMKDESAQLSLFAEEEPKEVIQLAVSK
LEQDVLEQIRSVNVSGTTPMDALQLVYALQQSLIKK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatatacaccgatgattcaacaatatttacaagtgaaagcagattataaagat
gcttttttatttttccgattaggtgatttttatgaaatgttctttgatgatgctataaaa
gcttctcaaattttagaaataacattaacgagccgagatgcaggtatgaaagaacgcatt
cctatgtgtggtgtgcctcatcattccgctaaaaattatatcgagacacttgttcaaaaa
ggttataaagtagcagtttgtgaacaaacagaagatgtcaaacaagcaaagggtgttgta
aaacgtgaagttgttcagctgattacacctggaacaattatggaaggcaaagcgttagat
ggaaaaacaaatcacttcatcgcagctgctgagcaaataaacacctcagaatatgctttt
tgttatttagatttatcaactggtgaggcgactgttacttatgtcgaaggtgatggtcta
gtcttattacaacaacttcaatcatttggtattcgagaaatggttgtttcagagcaatta
tttgcagaactaactgaacaagcagaagcattatctattgtcttatcaattgaagaagag
gtaatggatgaatcgaaaagtgcacagtatttagaagaggcaccaagtaatttacatggt
gctggacgaaagcttctacactatattgaacgtactcaaatgcgctcactttctcatatt
caaccattccaatacaatgaaaacaaaaattatctaaatatagatacaaactcaaaacgt
aatttagaacttattcaatcgctacgtggtggggatcaaaaaggaacacttttatggtta
ctagacgaaactgttactgcaatgggtggtcgaaaattaaagcagtggttacatcaacca
ttagcaaaccgtcaacatattgaaaatcgcttgagcatcgtgacagatttgttggaagaa
tattttgttcgagcagaattacaagaattatttaaacaagtgtatgacttagaacgccta
gcaggacgtgttgcttttggaaatgttggaggacgtgatttagcgcaattaagagaatcg
ttacgtcaggttcctgtcattcaagaacaactacaaaattcttcaaaagcaaacctacaa
aacttagggaacgcacttgatttatgtagtgatgtagaaagttatttaagtcatgcgatt
acggatcacccaccaatctcgattaaagaaggagatgttatccgcggtggctatgatgca
aaattagatgagcttcgttatgcctctcgcaacggtaaagactggattgcagcacttgag
aaacaagagcgtgaaaaaacaggaattaagaatttgaaaattggttataaccgagtgttt
ggatattacatcgaaatcacgaaatcgtatattcatttagctgatttagaaagatatgaa
cgtaaacagacgcttgctaatgcagagcgctacattacagatgaactaaaggaaaaagaa
gccattattttaaatgctgaagaagaaagtttggcactcgaatatactttattcacacaa
atccgtgaagaattaaagcaatatattccgagattacaagcacttgcttctgctattagt
gaattagatgtctacgtgggttttgcaactgttacagaaaagtatcgtttcacaaaacca
gtcttccatgaaggacgctcacttaaaattgttaatggtcgtcatccggtcgtcgagaaa
atgatgaatcagcaattatatgtgccaaatgactgtatattgactgatgatcgcaatatg
atgctaattacaggaccgaatatgtctggtaaaagtacgtatatgagacaagtggcgctt
ataacaattcttgcgcaaatgggctgctatgttccagcagatgaagcggaattaccaata
actgatcaaattttcacacgtattggtgcagcggatgatttagcagctggacaaagtacg
tttatggtagagatgttggaatcacaacatgctattacaaatgctacagagaaaagctta
ttgctctttgatgaaattgggcgtggtacatcaacttatgatggtatggcattagcacaa
tctatgatggagtatattcacaataaaatcggcgctaatacattattctctactcattat
catgaattaacagatttagaaaatgacttaaatcgtttgcaaaatgttcatgtttcagca
atggagcaagatgggaaggtagtctttttacacaaagtaaaaaaaggcccggctgataaa
agttatggtatacatgtagcagagttagcagaattaccggctgatattatttctagagca
cgtattttacttgaagaatttgagacaactaatgcagtctcggctgcaaccgttacaaaa
gcagaagcaacgcctattgtgaaggatgaagcagttgctattatgaaggacgaatctgca
caactttctctatttgctgaagaagagccgaaagaagttattcaattagctgtttctaaa
ttagaacaagatgtgctagaacaaatccgatcagtaaatgtatctggtacaacacctatg
gatgcattgcaacttgtttatgcattgcaacaatctttaataaaaaagtag
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