Viridibacillus arvi: JNUCC6_21980
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Entry
JNUCC6_21980 CDS
T06874
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
vij
Viridibacillus arvi
Pathway
vij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JNUCC6_21980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vij03400
]
JNUCC6_21980
DNA repair and recombination proteins [BR:
vij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JNUCC6_21980
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GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QOV11188
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Position
4472673..4474571
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AA seq
632 aa
AA seq
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MNEGTFEKLQYNELKEILKSYCVSGLGKQLFDKLIPSSNLKVVKHRLTETSEARAILDAG
GNVPFIGVSNTEYIIAKLEKGIILDPSELLSISDFLRGCRKIKIFMTSKEPFAPTLASYA
NSMTEFMEVEEEINFSIKNNRVDSSASKELKRVRHHIQTTEQKIKERLNKFLNSSVNRNY
IQEFLISIKDDHYTVPIKASYKNQVQGTIIEISSRGSTVFMEPSVVGKLSVELATLKSEE
AMLEYQILATLTGLVAENLQPININIELVSQYDFIFAKAKYSRHVDGIEPNINDHGNIKL
INCKHPLLSGHVIPLQFEIGSSYRSLIITGPNAGGKTIVLKTIGLVTLATMSGFHITASK
ETEIAVFERIFVDIGDNQSLENALSTFSSHMKNLSEILQSVNNNTLLLFDEIGSGTEPNE
GAALAISLLEEFYLKGCITVATTHYGEIKRFSEMHSDFMNAAMQFNHETLEPLFKLLIGQ
SGDSNAIWISRKMKVPENVLKRAEDYMKNKEYRMERLNESKIPRPKAVVEKAKNNIDYQK
GDRVKLLDHDDFGIVYKEKDKYYNVTVYYQNQFIEVNEKRLALELKAVELYPEGYDIDTL
FIDYKTKKLNHDIERGSKKALRKIHKEIRENK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaggtacttttgaaaaattacagtacaatgaattaaaagagatcttaaaatct
tattgcgttagcggactaggtaaacaactatttgataaattaattccaagttctaactta
aaagtagtcaaacatcgattaaccgaaacatctgaagcacgtgccattctagatgcagga
ggaaacgtgcctttcataggtgtttccaacactgaatatattattgctaaattagaaaaa
ggtataattttagacccatcagagcttttaagtatttccgattttttaagaggctgccga
aaaataaaaattttcatgaccagtaaagaaccttttgctccgacattggcgtcctatgct
aattccatgacagaatttatggaggtagaagaggaaattaatttttctatcaaaaataat
cgggtcgactcgtccgccagcaaggaactcaaacgtgttcgtcaccatatccaaacaact
gaacaaaaaataaaggagagattaaataaatttttaaacagcagtgttaatagaaattat
atccaggaatttttaattagtatcaaagatgatcactatacagtaccaataaaagcatca
tacaaaaatcaagtacagggaaccataattgaaatatcttctagaggttcgacagtcttt
atggaacctagtgtggtagggaaattaagtgttgaattagcaacattaaaatcagaagag
gcaatgttagaatatcaaatactagccactttaactgggctagtggcagagaatcttcaa
cctattaatattaatattgagcttgtatcccagtacgattttatttttgctaaagctaaa
tatagcagacatgtggatggtattgagccaaacataaatgatcacggtaatataaaatta
ataaattgcaagcatccattattatcgggtcatgttataccacttcaatttgagattgga
agtagttatcgtagtttaatcataaccggacctaatgctggaggaaaaacaattgtgctt
aagacaattggtcttgttactttggctactatgtccgggtttcatattacagcttcgaaa
gaaaccgaaattgcagtatttgagcgcatttttgtagatattggcgacaatcagagttta
gaaaatgcacttagcacgttctcttctcacatgaagaacttatcagagatacttcaatca
gtaaacaacaataccttgttattatttgatgagataggcagtgggacagaaccaaatgaa
ggagcagcgttagcaatctccctcttagaagagttttatcttaaaggatgtattactgtt
gcgacaacgcattatggagaaataaaacgtttttccgaaatgcatagtgactttatgaac
gctgctatgcaatttaatcatgaaacattagaaccattatttaaacttctcatagggcaa
tctggagatagtaatgccatatggatctctagaaaaatgaaagtaccggaaaatgttcta
aaaagagcagaagattatatgaaaaataaagagtatcgaatggaacgattaaatgaaagc
aaaatcccgagaccaaaagcagttgttgaaaaagcaaaaaataatatcgactatcagaaa
ggagaccgtgtaaaactgcttgaccacgacgactttggaatagtgtacaaagaaaaagac
aaatattataacgttactgtgtattatcaaaatcaatttattgaggtaaacgaaaaacgg
ttggctctagagttaaaagctgtagagttatatccagaaggctatgacatagacacttta
ttcattgattataaaacaaaaaaacttaatcatgatattgaacgaggctcgaaaaaagca
cttcgtaaaatccataaagaaattcgggaaaataagtaa
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