Virgibacillus phasianinus: CFK37_00950
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Entry
CFK37_00950 CDS
T04951
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vil
Virgibacillus phasianinus
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vil03019
]
CFK37_00950
Messenger RNA biogenesis [BR:
vil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFK37_00950
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Coa1
Motif
Other DBs
NCBI-ProteinID:
ASK60875
UniProt:
A0A220TYP5
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Position
complement(191021..191971)
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AA seq
316 aa
AA seq
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MNKGLGYLNIGEAFDGFVLIKDATRGVASNGKPFLTLILRDSTGEIDAKLWDVSKEDEAI
FVAEQIVKLSGEINQFRGKAQLKILSLRPAQPTDDVHVTDFIEKAPVDKEVLMERLTEAI
FEMENPTMQRIVRAFIKRYQDALLTYPAATKNHHEYVSGLAHHIVSMVALARELHHLYPQ
LNKDLLYAGIILHDLGKLKELSGVITTSYTIEGKLLGHIPMMVEEIGHVARELQIEEDEE
VLILQHLVLSHHGKAEWGSPKPPMVREAELLHLIDLIDAKMNMLNRSLEKIKPGEFTERI
FALDNRSFYKPLFEKN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggactcggatacttaaatatcggagaagcatttgacggatttgtcctgatt
aaagatgccacccgtggtgtggcgagtaatggaaaacctttcttaacactgattcttcgg
gactcaactggagaaattgatgcaaagctatgggatgtttcaaaagaagatgaagcaata
tttgttgctgaacaaattgttaaattgtcaggagagattaatcaatttcgtggaaaagca
cagcttaaaattttgtccttaaggcccgcacagccgacagatgacgttcatgtaacggat
ttcatcgaaaaagcaccagttgataaagaagtattaatggagaggctgactgaggcaata
tttgaaatggaaaaccctacaatgcaacgaatcgtccgggcctttataaaacgatatcag
gacgcattgttaacctatcctgctgcgacgaaaaatcatcatgaatacgtttccgggttg
gcccatcatattgtaagtatggttgcgttagcacgggaattgcaccatttatatcctcag
ttgaacaaagatttattatatgcgggtattatcttacatgatttagggaaattaaaagaa
ttatctggggtaataacaacgtcgtatacaatcgagggaaaattgcttggtcatattccg
atgatggtggaagaaatagggcatgttgcgcgtgaattgcaaatcgaggaagatgaagag
gttctgattttgcagcatttggtcctaagtcatcatggtaaagcagaatgggggagtcca
aaaccgccaatggtccgtgaagcggagctcctgcatctgattgatctaattgatgcgaaa
atgaatatgcttaaccgctcacttgaaaaaatcaaaccaggtgaatttacagaacgaatt
tttgccttggataatcggtccttttacaaacccctatttgaaaaaaactaa
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