Virgibacillus phasianinus: CFK37_02660
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Entry
CFK37_02660 CDS
T04951
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vil
Virgibacillus phasianinus
Pathway
vil03420
Nucleotide excision repair
vil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFK37_02660 (pcrA)
03430 Mismatch repair
CFK37_02660 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vil03400
]
CFK37_02660 (pcrA)
Enzymes [BR:
vil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK37_02660 (pcrA)
DNA repair and recombination proteins [BR:
vil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFK37_02660 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CFK37_02660 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
RE_ApaLI
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASK61169
UniProt:
A0A220TZF3
LinkDB
All DBs
Position
complement(531969..534188)
Genome browser
AA seq
739 aa
AA seq
DB search
MSQTIDDLLKGLNNEQQQAVKQTEGPLLIMAGAGSGKTRVLTHRIAYLLSEKDVAPRNVL
AITFTNKAAREMKARVSKLIGPESEKIWVSTFHSMCVRILRRDIDRIGYNRNFTILDSGD
QLSVIKQILKNLNIDPKKFEPRAMLGAISNAKNELITPEEYSKNVGNFYDRQISEIYTSY
QKTLQKNQSLDFDDLIMQTIHLFKRVPEVLESYQRRFQYIHVDEYQDTNHAQYFLVKQLA
SRFQNICVVGDSDQSIYGWRGADITNILTFEKDYPSAKSVFLEQNYRSTKAILSAANKVI
ENNTGRKPKNLWTENDDGKNINYFQGGTEHEEAFFVTDKIQELTREHGYTPNDIAVLYRT
NAQSRAIEDTLMKSTIPYQMVGGTKFYERKEIKDMVAYLRLITNPDDDLSFERVVNVPKR
GIGKTSVDRIRAHAADHGISFFETVKEIDFVGVSKKAAQALSEFGSLIGSLSQQQEFLTA
TDMVEAVLKRTGYEESLKRENTIESQSRLENLEEFMTVTQDFEETSEEDKTLVTFLTDLA
LIADIDKVEDEDEVADEKITLMTLHAAKGLEFPVVFLIGMEENVFPHSRSMFDEDEMEEE
RRLAYVGITRAEKELYVTHAKMRTLFGRTNMNPISRFINEIPTDLLDGIEEAREAMFGGR
RPIQETPAPVKRKAQKMQTTTGAENQPWSTGDKASHKKWGTGTVVKVQGEGEAMELDIAF
PAPTGIKRVLAKFAPITKQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcagactatagacgacttactaaaaggattaaataatgagcagcagcaggcagtt
aaacaaacagaaggaccattgctcatcatggcaggtgcaggcagtgggaaaacgcgcgtg
ttaacacatcgcatcgcctatttactcagtgaaaaggatgtcgcaccaagaaatgtttta
gctataacctttacaaataaggcagcacgtgaaatgaaagcacgtgtaagtaagttgatt
ggaccggaaagtgaaaaaatctgggtttctacctttcactccatgtgtgtccgtatttta
cgccgcgacattgatcgaattggctataatcgtaacttcaccattttagacagtggtgac
cagttatcagtcattaaacaaattcttaaaaacctcaatatagacccgaaaaagtttgag
ccaagagcaatgcttggggcgatcagtaatgcaaagaacgaattaatcacaccggaggaa
tacagcaagaatgtaggcaacttttatgaccgccagatatccgaaatttacacgtcgtat
caaaaaacactgcagaaaaatcaatccctcgattttgatgacctaattatgcaaaccatt
cacttgtttaaacgggttccagaagtgctggaaagctaccaaagacgctttcaatatatt
catgttgatgagtatcaggatacaaaccatgcacagtatttcctggtgaagcagcttgca
tcacgcttccagaacatttgtgttgttggtgattcagatcaatcgatttatggatggcgc
ggagccgatattactaatattttaacctttgaaaaggactatccgtctgcaaaatcggtc
tttctggaacaaaattatcgttcaacaaaggctattctgtcagcggcaaataaagtgatt
gaaaacaatacagggcgtaagccgaagaacctgtggacagaaaacgatgacggcaagaat
attaattattttcaaggtggaactgaacatgaagaagcgttttttgttacggataaaatt
caggaactgacacgtgaacatggctatacaccgaacgatattgcagtgctttaccggacg
aatgcccagtcacgggcaattgaggatacattaatgaaatcaaccatcccatatcaaatg
gtaggtggaacaaaattctacgagcgaaaagaaatcaaagacatggtagcttatctacgc
ttaatcactaatcctgatgacgatttaagctttgagcgagtggtaaatgttccaaagcgc
ggtattggcaaaacatcggtcgaccgcattcgtgcgcatgctgccgatcatggaatttcc
ttttttgaaacggtgaaggaaattgactttgtcggtgtttcgaaaaaggctgcacaggca
ctatcggaatttggctcattaattggatcgctatcacagcaacaggaatttttgaccgca
actgatatggttgaagcggttttaaagcggacaggctatgaagagtcactaaaaagagaa
aataccatcgaatcacaaagcagactggaaaacttagaagaatttatgacggtaacccag
gattttgaggaaacaagcgaggaagacaaaacccttgttacattccttactgacctagca
ttgattgctgatatagataaggtggaagatgaagatgaagttgcagatgaaaaaattacg
ctaatgacactgcatgctgcaaagggccttgaatttccggttgtttttctaatcggaatg
gaagaaaacgtcttcccgcattcaagatccatgtttgatgaagatgaaatggaagaagag
cgcagacttgcttacgttgggattaccagagctgaaaaggaactttatgtaacgcatgca
aaaatgcgtacactatttggtcgtacaaatatgaacccaattagccgattcatcaacgaa
atccctaccgacctgcttgatggaattgaggaagcccgggaagcgatgtttggaggacgc
agaccaatccaagaaacaccagctcctgtcaaacgcaaagcacaaaaaatgcagacaacc
acaggtgcggaaaatcagccatggtcaactggtgacaaagcatcacacaaaaaatggggt
actggtactgttgtgaaggttcaaggtgagggggaagcaatggaacttgatattgcattt
ccggcgccgaccggcattaaacgggtattggcaaaatttgctccaatcacgaaacaatag
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