Virgibacillus phasianinus: CFK37_04850
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Entry
CFK37_04850 CDS
T04951
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vil
Virgibacillus phasianinus
Pathway
vil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFK37_04850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vil03400
]
CFK37_04850
Enzymes [BR:
vil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CFK37_04850
DNA repair and recombination proteins [BR:
vil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFK37_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASK61548
UniProt:
A0A220U0E0
LinkDB
All DBs
Position
complement(956248..956826)
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AA seq
192 aa
AA seq
DB search
MTDFCPVSWPEEPTPDDWKACKECGLYEHGSRMVWGEGNPEAPIMVVLDNPGLREDREGN
QFVCGTRQTLQKVANDVGLNMDDLYVTYILKRKPTRAYEKEQARTVCMLHLKDQLQAKQP
ELVICLGNVAVQSFFHDSDVDVKSLRGSVHDVHGYQTMVAYHPLAVRRRPNLWNLFLEDW
TNAANQYHENDN
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttgacagatttttgtccagtttcatggcctgaagagcctacacctgatgattggaaggca
tgcaaagaatgtggcctttacgagcatgggtcaaggatggtttggggcgaagggaatccg
gaagcacccatcatggttgtccttgataatcccgggttacgtgaagatcgcgaaggaaat
caatttgtctgtgggactaggcagacattgcaaaaggtagctaatgatgttggcttaaac
atggatgacctgtatgtcacctatattttaaaaagaaagccaacccgtgcttatgaaaaa
gaacaggctcgcacagtctgtatgcttcatctcaaggatcagcttcaggctaagcaacct
gagttggttatttgccttggaaatgttgcagtacaatccttttttcatgattctgacgtt
gatgtaaaatcattacgcggctctgttcatgatgtacatggatatcagacaatggtggct
taccacccattagcggttcggcgccggcccaatctatggaatttatttttggaagactgg
acaaatgctgccaatcaatatcatgaaaatgataattaa
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