Virgibacillus phasianinus: CFK37_06000
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Entry
CFK37_06000 CDS
T04951
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vil
Virgibacillus phasianinus
Pathway
vil03030
DNA replication
vil03430
Mismatch repair
vil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFK37_06000
03430 Mismatch repair
CFK37_06000
03440 Homologous recombination
CFK37_06000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vil03032
]
CFK37_06000
03400 DNA repair and recombination proteins [BR:
vil03400
]
CFK37_06000
Enzymes [BR:
vil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFK37_06000
DNA replication proteins [BR:
vil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFK37_06000
DNA repair and recombination proteins [BR:
vil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFK37_06000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
DnaX_C
AAA_22
AAA_30
TIP49
AAA_19
AAA_5
AAA_16
PIF1
AAA_assoc_2
AAA_2
Mg_chelatase
AAA_14
RCF1-5-like_lid
AAA_lid_RFC1
AAA_7
VapE-like_dom
Hydant_A_N
TsaE
Motif
Other DBs
NCBI-ProteinID:
ASK61740
UniProt:
A0A220U108
LinkDB
All DBs
Position
complement(1168663..1170360)
Genome browser
AA seq
565 aa
AA seq
DB search
MSYQALYRVWRPRSFTDVVGQSHITRTLQNAIEQEKFSHAYLFSGPRGTGKTSAAKIFAK
TINCEKAPVREPCNECASCRGIQDGSISDIIEMDAASHTSVEDIREIRDKVKYASSVVPY
KVYIIDEVHMISVNAFNALLKTLEEPPKHVVFILATTEPHKIPLTIISRCQRFDFKPITS
QAIVERMRAIMEQEEITVSPEALETVALAAEGGMRDALSILDQAISYSGDQVTLQDVLAV
TGGVSQQVLTDIVQEMFEHNVQGALKLLDDIIQNGKDPGRFVFDLIYFLRDLLLYQSAPS
LEGILERAMIDERFKELSRLVTVDWIQHAIMELNQCQQEIKWSNSPKVFIEIAILSLSAN
ESNQAADEKPVNPVVNDESLQKLANKVDMLEKELEKWKGQAPAANSAPPRESRRTKPRAS
KNSYKTPYEKIRNVLREAEKSSLKQVQSQWGSFLSSLKTANAPAHATIQDSKPAAASDKA
LVVAFKYEIHCSLFLDNQETVEAVLAKSIGKELTIIPIPENNWQELRNEYVNKQETTTNQ
QEETSDPLIEEARKLVGDDLLEIHD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagcattatatcgtgtatggcgtccgcggagctttacggatgtcgtggga
caatcacatataacacgcacattgcaaaatgcaattgaacaggaaaagttttcgcatgca
tatttattttcaggcccgcgtggtactggaaagacaagtgctgccaaaatttttgccaag
acaattaattgtgaaaaagcgccagttcgtgaaccatgcaatgaatgtgcatcatgccgt
ggaatacaggacggttcgatttcggacattattgaaatggatgctgcgtcacatacgagt
gttgaggatatccgagaaatacgtgacaaggtgaaatatgcatcaagtgtcgttccctac
aaggtgtacattattgatgaagttcatatgatctctgttaacgcttttaacgcgctttta
aaaacattggaagagccgcctaaacatgtcgtatttattttggcgacaactgaaccgcat
aaaatcccgttaacaattatttcccgttgtcagcgctttgattttaaaccaattacgagt
caggcaattgtggaaagaatgcgtgcgattatggaacaggaagaaataactgtatcacct
gaggcacttgaaacagtggcattggctgctgaaggtggaatgcgtgatgctttaagtatt
ctagatcaggctatatcatacagcggggaccaagttacattacaggacgtgcttgctgtc
acaggtggcgtttcacaacaagttcttacagatattgtacaagaaatgtttgagcataat
gttcagggtgcgttgaagctgctcgatgacattattcaaaatggaaaagacccaggcagg
tttgtatttgatcttatttattttctgcgcgatttgctgctctatcaaagcgctccgtcg
ctggaaggaattctagagcgtgccatgatcgatgaacggtttaaggaactttcccgtctt
gtcactgttgactggattcagcatgcaatcatggagttgaatcaatgccagcaggaaatt
aaatggagtaatagcccgaaagtatttattgaaattgccattttaagtctttctgcaaac
gaaagtaaccaagctgccgacgagaagcctgtgaatccagtggttaatgatgaatcgctg
caaaaattggcaaataaagtggatatgctagaaaaagagctagagaaatggaagggccag
gcaccggcagctaattctgccccgccaagagaatcaaggcgaaccaaacctcgcgcctca
aaaaatagctacaaaacgccgtacgaaaaaattcgtaatgttttgcgggaagctgagaaa
tcttccttaaaacaagttcagtcacaatggggatcttttttaagttcattaaagacggca
aatgcgcccgcccatgcgacaatccaggatagtaaacctgctgcagcgtctgataaagca
ctagttgttgcatttaaatatgaaatacattgctccttatttttagataatcaggagaca
gttgaagctgttttagcaaagtcaattggtaaggaactaaccattattcctatcccagaa
aataattggcaggaattgcgaaatgaatatgtaaacaaacaggaaacaacaactaaccaa
caggaagaaacatcagatccacttattgaagaagcaagaaagcttgttggagacgacctg
ttagaaattcatgattaa
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