Virgibacillus phasianinus: CFK37_07485
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Entry
CFK37_07485 CDS
T04951
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vil
Virgibacillus phasianinus
Pathway
vil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFK37_07485 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vil03019
]
CFK37_07485 (recQ)
03400 DNA repair and recombination proteins [BR:
vil03400
]
CFK37_07485 (recQ)
Enzymes [BR:
vil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFK37_07485 (recQ)
Messenger RNA biogenesis [BR:
vil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFK37_07485 (recQ)
DNA repair and recombination proteins [BR:
vil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFK37_07485 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
HTH_40
RecQ_Zn_bind
ResIII
HHH
ABCA11_C
Motif
Other DBs
NCBI-ProteinID:
ASK62012
UniProt:
A0A220U1X6
LinkDB
All DBs
Position
complement(1466929..1469070)
Genome browser
AA seq
713 aa
AA seq
DB search
MIAEAEKILQTYYGFPAFRPGQKETISNILELKNTLAVMPTGGGKSICYQIPGLTLDGVA
IIISPLISLMKDQVDALNSLGIAATYINSSLTTGEQQQRIQDIQANRYKFVYVAPERFES
SYFVQLVKRLPIALVAFDEAHCISQWGHDFRPSYRSIVPNLKALSNIPVYVALTATATEE
VITDIQNLLHVDHEHVINTGFERDNLAFHIVKGKDKQSYVRSFLAERKNESGIIYTATRK
QADTLFDQLTAKGYSVAKYHAGLSEDERKKAQAAFIQDEIQVMIATNAFGMGIDKSNVRY
VIHYAMPMTIESYYQEAGRAGRDGEPSDCILLFSPQDIQLQKFLIEQSLMDDEAKRAEYR
KLQAMINYCHTHSCLTSFILEYFNDTHGKKSCGRCSNCVNRTDRTDMTKEAQMILSCVKR
MGERFGVSMTAKVLKGSRDKKIKDFKLHLISTYGILSNYTEKALTEWIHFLIAEKLLATE
EGRYPTLRLNQGSVDVLMGKQTVWMYSTVIPTSESADYREDLFEELRQLRKQIADEQSVP
PYVLFSDATLKELSRYFPDSKDDMLTIKGIGEKKYEQYGEAFLAVIQAWRERNPDVKTKV
RIADSAPAQPKPKTTDEPSYLISYQMFQRGKSIKDISVIRGMSQQTIEGHIFKATKQGYP
IAWGIFFTDEEERNVLEIRNEIDEPKLKPLKDMLPEGYSYTKIKAVLVKNEYM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgattgctgaagcagagaaaatcctacaaacttattatggttttccagcctttcgacct
ggccagaaagaaaccatatccaatatacttgaattaaaaaacacactggctgtcatgcct
accgggggcggtaaatcgatatgttatcaaattcccggtttaacacttgacggtgtcgcg
attattatttcacctctcatttcgctaatgaaggatcaagtggatgcattaaattcactt
ggtatcgctgctacatatatcaatagttcattaacgacaggcgaacaacaacagcgtatt
caggacatccaggcaaaccgttataaattcgtttatgttgccccggaacgatttgaatct
tcctattttgtacaactggtaaaacgtttgcccattgcattagtagcatttgatgaggca
cattgtatctcacaatggggacatgatttcaggccaagctaccgctcgattgtgccgaac
ctgaaggcgttatccaatatccctgtgtatgtagcattgactgctaccgcgacagaagaa
gtgataaccgacattcaaaatttgctccatgttgatcatgaacatgttattaatacaggg
tttgagcgtgacaacctggcatttcatattgtcaaaggaaaggacaagcagagctatgtc
agatcctttcttgctgaacgaaaaaatgaatcaggaattatttatacagcaacacgtaaa
caggctgatacgttatttgatcaactaactgcaaagggatattccgtggcaaaatatcat
gccggattgtcggaggacgaacgtaaaaaagcgcaggcagcatttatacaggatgagatt
caagttatgattgcaacgaatgcatttgggatggggattgataaatcaaatgtccgctac
gttattcattatgcaatgccgatgaccatcgaatcgtattatcaggaagccggacgcgct
ggacgggatggcgagccaagtgactgtattttattgttttccccgcaggatatccaatta
cagaagtttttaattgagcaatcgttaatggatgacgaggcaaagcgggcggaataccga
aagctgcaagccatgatcaactattgccatacgcatagctgtctaacttcctttattctg
gaatattttaatgacacacatggtaaaaagtcatgcggtcgttgcagcaattgcgtaaac
cggaccgatcggactgatatgacaaaagaggcacaaatgattctttcgtgcgtgaaacga
atgggtgaacggtttggtgtaagcatgaccgcaaaagtccttaaaggatctagagataaa
aaaataaaagactttaaactgcatcttatatccacttacggaatcttgtccaactatacc
gaaaaggcattaactgaatggatccactttttaattgcggaaaaactgcttgcaacggaa
gaaggacgctatcccactctacgattaaatcagggatcggttgatgttttgatgggaaaa
cagacagtttggatgtattcaactgtgattccaactagtgaaagcgccgattatcgggaa
gatctttttgaagagttacgacaacttcgtaaacaaattgcagatgagcaaagtgtgcct
ccttatgtactgttttctgatgcaacattaaaagaattaagtcgctatttcccggattca
aaagacgatatgttaacgattaagggaattggcgagaaaaagtatgaacagtacggcgaa
gcctttttagcagttattcaggcatggcgcgagcggaatcctgatgtcaaaacgaaggta
agaattgctgacagcgcaccagctcagcccaagccgaaaacaacggatgagcctagctat
cttattagctatcaaatgttccagcgcggcaaatctattaaagacatatccgttataagg
ggtatgtcgcagcagacaattgagggacatatttttaaagcaacgaaacaggggtaccct
attgcctggggaatcttttttacggatgaagaagaaaggaatgtcttagaaattcgtaat
gaaattgacgagccaaaactgaaaccattaaaggatatgctcccggaaggttatagttac
acaaaaatcaaagcggttttggtaaaaaatgaatatatgtga
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