KEGG   Virgibacillus phasianinus: CFK37_11545
Entry
CFK37_11545       CDS       T04951                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
vil  Virgibacillus phasianinus
Pathway
vil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CFK37_11545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vil03400]
    CFK37_11545
DNA repair and recombination proteins [BR:vil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CFK37_11545
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CFK37_11545
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_16 AAA AAA_30 AAA_19 UB2H P-loop_SecA AAA_7 TrwB_AAD_bind PMT2_N DUF87 AAA_22 AAA_5 Gluconate_2-dh3 Alpha-mann_mid UFL1
Other DBs
NCBI-ProteinID: ASK62732
UniProt: A0A220U413
LinkDB
Position
2419061..2421043
AA seq 660 aa
MKNKFDLVSQYKPSGDQPKAIEELVKRVKAGQHHQTLLGATGTGKTFTVSNVVTEINRPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSFYDYYQPEAYVPSSDTFIEKDASINDEID
KLRHSATSALFERNDVLVVASVSCIYGLGSPEEYGSHVLSIRMGMEKDRDQLLRELVDIQ
YARNDINFQRGTFRVRGDSVEIIPASREEHCIRIEFFGDEIDRIREVDALTGEIIGDREH
IAIYPASHFVTREEKLKLAIKNIETELEERLKVLRSENKLLEAQRIEQRTNYDIEMMNEM
GYCSGIENYSRHLTLREEGATPYTLFDYFPDDFLVVIDESHVTLPQIRGMYNGDQARKQV
LVDHGFRLPSALDNRPLKFDEFEAKSNQLIYVSATPGPYELEHTPEMTEQIIRPTGLLDP
KIDVRPIEGQIDNLIGEINKRADRNERVLVTTLTKKMSEDLTDYLKELGIKVAYLHSEIK
TLERIEVIRDLRVGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSDRSLVQTMGR
AARNENGEVVMYADKITKSMQFAINETMRRREKQIAYNNEHDIIPMTIKKDVRDVIRATV
AAEDQADYDDKSESFAKLTKKEKDKAIKNMEKEMKEAAKALDFEKAAELRDVLLELKAEG
NT seq 1983 nt   +upstreamnt  +downstreamnt
gtgaaaaataagtttgatcttgtgtcccagtataaaccaagcggggaccagccaaaagct
attgaggaattagttaaacgagtaaaagcgggacagcatcatcagacattgcttggagca
acagggactggtaagacatttaccgtttcaaacgttgtgactgaaataaatagaccgaca
ttagttattgcgcataataaaacgctggcaggtcagctgtacagcgagtttaaggaattc
tttccgaataatgctgtggaatactttgtcagcttttacgattactatcaaccagaggca
tatgtaccgtctagtgatacatttatcgagaaggatgcaagtatcaatgatgaaatagat
aaattgcggcactcggctacttcagccctttttgagcgaaatgatgtgcttgtcgttgcc
agtgtttcttgtatttacgggctaggttctccagaagaatacggaagtcacgtgctttcc
attcgaatgggcatggaaaaagaccgggatcagttgctgcgtgaacttgttgatattcag
tatgcacgtaacgatattaatttccagcgtggaacattccgggtccgtggggattctgtt
gaaataattcctgcttccagggaagagcactgtatccgaatcgaattctttggtgatgag
attgacaggatacgtgaggtggatgcattaacaggtgaaattattggtgacagggagcat
attgccatctatccagcttctcactttgttacacgggaagaaaaattgaagctggcgatt
aaaaatatcgaaacagaattagaagagcgcttaaaggtactaagatcggagaataaactt
ttagaggcgcaacggattgaacaacgaaccaattatgatatcgaaatgatgaatgaaatg
ggctattgttcgggtatagagaactattcaaggcatttaactctccgggaggagggcgct
acaccgtatactttgtttgattacttcccagatgactttttggttgtgattgatgaatca
catgttacgcttccgcaaatcagaggtatgtacaacggagaccaggcgcgaaagcaggta
ttggtggatcatggattcagactgccatcagcactcgataaccggccgctcaagtttgat
gaatttgaggcaaaatcaaatcaacttatatatgtatctgctaccccagggccatatgaa
ttggaacatacacctgaaatgacagaacaaattattcggccaacaggcttacttgatcca
aaaattgatgtacggccaattgaaggccaaattgataatttaataggagaaataaataag
cgcgctgatcgtaatgagcgtgtattagtaaccacgctaacgaagaaaatgtctgaagat
cttactgattatttaaaagagcttggtattaaagttgcctatttacattctgaaattaaa
acattggaacgaattgaagttattcgtgatttacgtgttggcaagtatgatgtactagta
gggattaacctgctccgggagggtcttgatattccggaagtgtctctggttgctatcctt
gatgccgataaggaaggatttttacgttcagatcggtctcttgttcaaaccatggggcgc
gcagcacgtaacgaaaatggtgaggttgtcatgtacgcagacaaaatcactaaatccatg
cagttcgcaataaatgaaacaatgaggcgacgtgagaaacagattgcatacaataatgaa
catgacattataccgatgacaattaagaaagacgtgcgtgatgtaattcgagcgactgtt
gcagctgaagatcaagcagattacgatgataaatcggaaagctttgctaaactaaccaag
aaagaaaaagataaagcaatcaagaatatggaaaaagaaatgaaggaagctgccaaagca
cttgattttgaaaaggcagcagaattacgtgatgttttacttgaattaaaagcggaagga
tga

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