Virgibacillus phasianinus: CFK37_15740
Help
Entry
CFK37_15740 CDS
T04951
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vil
Virgibacillus phasianinus
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vil03032
]
CFK37_15740
03400 DNA repair and recombination proteins [BR:
vil03400
]
CFK37_15740
Enzymes [BR:
vil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFK37_15740
DNA replication proteins [BR:
vil03032
]
Prokaryotic type
DNA Topoisomerases
CFK37_15740
DNA repair and recombination proteins [BR:
vil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFK37_15740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Rib_5-P_isom_A
Toprim_2
HypA
Motif
Other DBs
NCBI-ProteinID:
ASK63503
UniProt:
A0A220U704
LinkDB
All DBs
Position
complement(3256800..3258878)
Genome browser
AA seq
692 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVTASMGHVRDLPKSQMGVDPDDEFKPKYITIRGK
GDVLKSLKSAAKKAKKVYLAADPDREGEAIAWHLAHSLNIDETSDCRVVFNEITKDAIKE
SFKHPRSINTDLVNAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKMIMDREK
EIENFTPEEYWSIEGNFVKGKDNFEGSFYGIDKKKTELKTEEDVNKVMEQLEGKNFTIDK
VNKRERKRNPAVPFTTSSIQQEAARKLNFRAKKTMMVAQQLYEGIDLGKKAGGITGLITY
MRTDSTRISDTAKSEAKDYIEEKHGKEFVGQKKAAKQKEGAQDAHEAIRPTSVARDPKSL
KSILSRDQYRLYKLVWERFVASQMAPAIMDTMTVHLINNGIEFRASGSKVKFKGFMSVYV
EGTDDKQKEENKYLPDLQEGMEVKATDVDPSQHFTQPPPRYTEARLVRAMEEQGIGRPST
YAPTLDTIQRRGYVSIDNKRFIPTELGSIVMDLLQEFFPEIIDLDFTVKMEGDLDSIEDG
KNDWVSILDEFYLDFRKRLEVAEEEMEKIEIKDEPAGIDCENCGHEMVYKMGRYGKFLAC
SNFPECRNTKPILKEIGVKCPKCKEGNVVERKSKKKRTFYGCDRFPECDFVSWNKPISRP
CPKCDSLLVEKKSKKETQIQCTNCDYKEKVQD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattatcttgtaatcgttgagtcgcctgctaaggcaaaaacgattgaacgatat
ttaggaaaaaaatacaaagtaactgcatccatgggccatgttcgcgatttaccaaaaagc
cagatgggtgttgatccagatgatgaatttaaaccaaagtatattacgattcgcggtaaa
ggggacgtgttaaagtcacttaaatccgctgctaaaaaagcaaaaaaggtatatctcgca
gccgaccccgatagggaaggggaagcgattgcctggcatctagcccatagtctcaatatt
gatgagacatccgattgccgggtggtttttaatgaaataactaaagacgcgattaaagaa
tcttttaaacatccaagatcaattaataccgatttagtaaatgcgcaacaggcacgaaga
atattagaccggttagttggttacaacataagtccgcttttatggaaaaaggtaaaaaag
gggctgagtgcaggacgtgttcaatcggtagcagttaaaatgattatggaccgtgaaaaa
gaaattgaaaactttacacccgaagaatattggtccatcgaaggaaactttgtgaaggga
aaagataactttgaaggttccttttatgggattgataagaagaaaacagaattaaaaaca
gaagaagatgttaacaaggtaatggaacaactggaaggaaaaaactttaccattgataag
gtaaataaaagggaacgaaagcgtaatcctgctgtgccatttactacatcttccattcaa
caggaagcagcaagaaaattaaatttcagagcgaaaaagacgatgatggttgcccagcag
ttgtatgaagggattgatttaggtaaaaaggcaggcggcataacaggtttaataacatac
atgcgtaccgattcaacccgtatttctgacactgctaagtcagaggcgaaagattatata
gaagaaaaacatggcaaagaatttgttggtcaaaagaaggcagcaaagcagaaagaaggt
gcacaggatgcccatgaagcaatcaggcccacttctgttgcacgtgatccgaaatcatta
aagtcaatattatcaagggatcaatatagactgtataaacttgtatgggaacgttttgtg
gcaagtcaaatggcaccagcaattatggatacaatgaccgtacatttaataaataatgga
atagaatttcgagcgtcaggttcaaaagttaaatttaaagggtttatgtctgtctatgtt
gaaggaacggatgataaacaaaaagaagaaaataaatatttacctgacctgcaggaagga
atggaagtgaaggcaactgatgttgatccaagccagcattttactcagccacctccgagg
tatacggaagcaaggctggtaagggcgatggaggaacaaggtataggacgaccatcaaca
tatgctccaaccttagatacaatacaacgcaggggatatgtaagtattgataataaacga
tttattcccactgaacttggcagcattgtgatggatctgcttcaggaatttttcccggaa
atcattgatttggactttaccgtaaagatggagggagaccttgactcaattgaagacggt
aaaaacgattgggtttccattcttgatgaattttatctggatttccgcaaacgccttgaa
gtggcggaagaggaaatggaaaaaattgaaattaaagatgagcctgcaggtattgattgt
gaaaattgcgggcatgaaatggtctacaaaatgggaagatatggtaaattccttgcatgc
tctaattttccagaatgcagaaatactaaaccaattttaaaagaaattggcgtaaaatgt
cctaagtgtaaagaaggaaatgtggttgagcgaaagtcgaaaaagaagcgcactttttat
ggatgtgaccgatttccggaatgtgattttgtgtcctggaataaaccgatttcaagacca
tgtccaaaatgtgattcgttgttagtggaaaagaaaagtaaaaaagaaacacagattcaa
tgtacaaattgtgattacaaagaaaaagtgcaagattaa
DBGET
integrated database retrieval system
