Virgibacillus phasianinus: CFK37_19060
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Entry
CFK37_19060 CDS
T04951
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
vil
Virgibacillus phasianinus
Pathway
vil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CFK37_19060
09124 Replication and repair
03420 Nucleotide excision repair
CFK37_19060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vil03021
]
CFK37_19060
03036 Chromosome and associated proteins [BR:
vil03036
]
CFK37_19060
03400 DNA repair and recombination proteins [BR:
vil03400
]
CFK37_19060
Enzymes [BR:
vil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CFK37_19060
Transcription machinery [BR:
vil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CFK37_19060
Chromosome and associated proteins [BR:
vil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CFK37_19060
DNA repair and recombination proteins [BR:
vil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CFK37_19060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
ASK64104
UniProt:
A0A220U723
LinkDB
All DBs
Position
3916067..3918376
Genome browser
AA seq
769 aa
AA seq
DB search
MTKLKTEGAKHLHLSARGLVEYVFRSGSIETGFRSTTPLVDGTKAHQKIQKTYGKNDQKE
VYLQTKISYNDITFQIDGRCDGLLKNDDGPSIVIDEIKSTSGPLDLITEETYPVHWAQAF
VYGYIYTTDNNLENITIQLTYVHLQSEQQKKFQRKMTRQELADFLMDMISQYTPYAKLRM
ELLEKRNASTKKLAFPFDNYREGQRKLAGAVFKTIQEKKTLFTKASTGIGKTISTIFPAV
KAISEGHLERIFYLTAKTITRTAAEETFRILQEKGLQLTVVTITAKQKICFQKEVNCDKA
ECPFANGYYDRINGAVLDILQHESILTRSVIETYARKHTVCPFEFSLDLAYAADVVICDY
NYIFDPRVSLQRLFDEQRKKTALLIDEAHNLVDRAREMYSATVNRADFLALYQEYKASKE
VIAKSAKAVSDHLLAKKKQNQIPERELDGKLVRAVNAFAYDAEEELRHGGDADELLLNTY
FAGQSFVKIADLYDKRFTSYVTVEGDDIALKLFCLDPSHQLKRMGKGFRSKIFFSATLTP
AGYYMDLLGGQEEDYVLSIPSPFEREYAEVIIQPLSTRFRDRERTLDPMVAFITDLLAKR
EGNFLVFFSSYTYMKMVYERFAIAAPKVQTIVQHGQMSEIDREVFLEAFEEKDDRKERLV
GFAVLGGIFSEGVDLKGNRLQGVIIVGVGLPQIGLERDIIKDYFQANGHHGYDYAYVYPG
MNKVLQAGGRLIRTDTDRGTIALIDDRFLQPKYQTMLPYEWQHWVQSPR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgactaaactaaaaacagaaggcgcgaaacacctccatctgtctgccaggggactcgtg
gaatatgtatttcgaagtggcagtatcgaaactggctttcgttcgacaacaccactggtt
gatggtaccaaagcacatcaaaaaatccagaaaacctatgggaagaacgatcagaaagaa
gtctatttgcaaacgaagatttcgtacaatgatatcacctttcaaatcgatgggcgctgt
gatgggctgctgaaaaatgatgacggcccttctattgttattgatgaaattaaatcgaca
tccggaccattggacctgatcacagaggaaacgtatcccgtgcactgggcccaggccttt
gtgtacggttatatctatacgacggataacaatctggaaaacatcacaatccaactaaca
tatgtacaccttcaatcagaacagcaaaagaagttccaacgaaaaatgacacgccaggaa
ttggctgacttcctaatggatatgatttcccaatatactccttatgccaaattgcgaatg
gagcttctggaaaaaaggaatgcaagtacaaagaagttggcatttccctttgacaattac
cgcgaggggcagcgtaaacttgctggtgctgtatttaaaacgattcaagagaaaaaaaca
ctgtttaccaaagcgtcaactggtatcggcaaaaccatttcaactattttccccgctgta
aaagcaattagtgaagggcatctggaacgaattttttatttgactgccaagacaatcact
cgtactgcagccgaagaaactttccgaattctgcaggaaaaaggccttcagttaacggtt
gtgacgattacagccaagcaaaagatttgttttcagaaggaagtgaactgtgataaagca
gaatgtccatttgctaacggctattatgaccgcatcaatggggctgttttggatatcttg
caacacgaatctatactaacaaggtccgtgattgaaacatatgcccgcaaacacacggtt
tgtccgtttgagttttcactggacctagcgtatgcggcggatgtcgtgatctgtgattat
aattatattttcgatccaagggtttccctgcagcgcctgtttgacgaacaaaggaaaaag
acagcactgctaatagatgaagcacataatctggtggaccgtgccagggagatgtattca
gcaacggtgaacagagcggactttcttgccttgtatcaggaatataaagcgagtaaggag
gttattgccaaatcggccaaagctgtgagcgatcacctacttgctaaaaagaaacagaac
caaataccagaaagagaactagatggaaagctggtacgtgcggttaacgcatttgcttac
gatgcggaggaagagttgaggcacggtggtgatgctgatgagttgttattgaatacgtac
ttcgcgggacagtcgtttgtaaaaattgcggatttgtatgataagcgatttacgagctac
gtgacagtcgagggcgatgatatcgcgttgaaattgttttgccttgatccatcccatcag
ctcaaacgtatgggtaaaggcttccgctcgaaaatattcttttcggcaacattgacacct
gcaggctattacatggatttacttggaggacaggaagaggactatgttctatctatcccc
tccccttttgagcgggagtatgccgaggtgatcatccagccactatcgacaagatttcgt
gacagggaacgcacgctagatccgatggttgcctttatcacagatttgctggcaaaacga
gagggtaattttctagtatttttctcgtcctatacttatatgaaaatggtgtatgagcga
tttgccattgcagcgccaaaagtgcagaccattgtacaacatggacaaatgtctgagatt
gatagagaagtgtttctagaggcatttgaggaaaaagatgatcgaaaggagcgtcttgtt
ggtttcgctgtccttggcggtattttttccgaaggtgtcgacctaaaaggaaaccggttg
caaggcgtgatcatcgttggcgtgggtttaccacaaatcggactggaacgtgatattatc
aaagattatttccaagcaaacggacaccatggctatgattacgcatacgtctatccgggc
atgaacaaagtgctacaagctggcggcagactcatccgcaccgatacagaccgtggcacc
atcgcacttatcgacgatcgcttccttcagccgaaatatcagacaatgttaccttatgaa
tggcagcactgggtgcaatcaccccgctga
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