Virgibacillus sp. MSP4-1: GWK91_04430
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Entry
GWK91_04430 CDS
T06398
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vim
Virgibacillus sp. MSP4-1
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vim03032
]
GWK91_04430 (topA)
03400 DNA repair and recombination proteins [BR:
vim03400
]
GWK91_04430 (topA)
Enzymes [BR:
vim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GWK91_04430 (topA)
DNA replication proteins [BR:
vim03032
]
Prokaryotic type
DNA Topoisomerases
GWK91_04430 (topA)
DNA repair and recombination proteins [BR:
vim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GWK91_04430 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHS22237
UniProt:
A0A6B9YCH1
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All DBs
Position
865637..867712
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AA seq
691 aa
AA seq
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MADYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQTGVDVDENYKPKYITIRGK
GPVLKELKTAAKKAKKVFLAADPDREGEAIAWHLAYSLDVDESSKCRVVFNEITKDAVKE
SFKHPRHIDMDLVDAQQARRILDRLVGYNISPLLWQKVKKGLSAGRVQSVAVRLVIERER
EIQNFQPEEYWTIETDFIKGKDTFQGSFYGLNGKKQKLSSQEDVNNILNKMDGDQFKVDK
VNKRERKRNPAAPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKKEGTVGLITYM
RTDSTRISNTAKQEAAEFIETSYGKEYLGSYKKKKDSEGAQDAHEAVRPTSVNRTPQSLK
SVLSRDQLRLYRLIWERFLASQMAPAVMDTVTAHLINNDVEFRASGSQIKFKGFMKVYVE
GQDDKKKEENKLLPPLEEGETVKAEEINPSQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRNYVTLENRRFVPTELGEIVVNILMEYFPEIIDIEFTAKMENDLDSIEEGK
TEWVNIIDDFYQGFEKRLKTAEQEMEKIEIKDEPAGEDCEECGHPMVYKMGRYGKFMACS
NFPECRNTKPILKEIGVKCPNCKDGNIVERKSKKNRTFYGCDNYPECEFISWDKPIARPC
PKCEGLLVEKKRKKATQVQCTQCDYKEEKQE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtaattgtcgaatcaccggcaaaagcaaaaacaatagaacgatat
ttagggaaaaaatataaagtaaaggcatccatgggacacgtgcgtgacctgccaaaaagt
caaacaggtgttgatgtggatgaaaactataaaccaaagtatataactattcggggaaaa
gggcctgtattgaaagaattgaagacggctgctaagaaggccaaaaaagtattcttagca
gccgacccggaccgggaaggagaggctattgcctggcatttggcatatagcctggatgtg
gatgagagttccaaatgccgtgttgtatttaatgaaatcaccaaggatgcagtaaaggaa
tcctttaaacatccacgacatattgatatggatttagttgatgcgcagcaggcaagaaga
attctggatcgtctggtaggttacaatattagcccattgctttggcaaaaagtaaagaaa
ggtttaagtgccggtcgtgtacagtctgtagctgttcgtcttgttattgaacgggaaaga
gagattcagaacttccaaccggaagaatactggacaatagaaacagattttataaaaggc
aaagatacctttcagggttctttttatggtttaaatggaaaaaaacagaagctgagctca
caagaagatgttaataacattttaaataaaatggatggagatcaatttaaagttgataaa
gtcaataaaagggaaagaaaacgaaatccagcagctccatttacaacatcgtctttacag
caggaagctgcccgtaagctgaatttccgtgcgaaaaagacaatgatgctggcccagcaa
ttatacgaaggaattgatctaggaaagaaagagggaacagttggtctgatcacgtatatg
agaaccgattctacccggatttcaaatacggctaagcaggaagctgcagagttcattgaa
acttcctatggaaaagaatatttgggctcttataaaaagaaaaaggattctgaaggggct
caggatgctcacgaggcagttcgtccaacttcagtgaatcgaacaccccaatctctcaaa
tctgttctgtcacgcgatcagctccgtctctatcgcctgatttgggaacgtttcttagcc
agtcagatggctccggctgttatggatactgtgacagctcatttaataaacaatgatgtt
gagtttcgtgccagtggatcccagataaagtttaagggctttatgaaggtgtatgtggaa
ggtcaggatgataaaaagaaagaagaaaataagcttcttccaccacttgaagagggagag
acggtaaaagccgaggagattaacccgagtcagcattttactcagccgcctccaagatat
acagaggcgcggttagttaaaacgcttgaagaacttggtatagggagaccatccacttat
gcacctacactggatacaattcagcgcagaaattatgttactctggaaaaccgccgtttt
gttcctaccgaactcggggaaattgtcgtcaatatactgatggaatactttccggaaatc
atagacatagagtttacagcaaaaatggagaatgacctggatagcattgaggaaggaaag
accgagtgggtaaacattattgatgatttttatcaggggtttgaaaaaagactgaaaacg
gcagaacaggaaatggaaaagattgaaattaaggatgaacctgcaggagaagattgtgag
gaatgtggacatcctatggtctataagatgggccgctacgggaagtttatggcctgctcc
aattttcctgagtgtcggaatacgaaacctattttaaaggaaattggtgtgaagtgtccc
aactgtaaggatggaaacattgttgagcgaaagtcgaaaaagaaccgtacattttatgga
tgtgacaattatcccgagtgtgaattcatttcctgggataaacctattgcaaggccatgt
ccaaaatgtgaaggtttattagtagaaaagaaaagaaaaaaagcaacccaggttcaatgt
acgcaatgtgattataaagaagaaaaacaggaataa
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