Virgibacillus sp. MSP4-1: GWK91_05950
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Entry
GWK91_05950 CDS
T06398
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vim
Virgibacillus sp. MSP4-1
Pathway
vim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GWK91_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vim03400
]
GWK91_05950
Enzymes [BR:
vim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GWK91_05950
DNA repair and recombination proteins [BR:
vim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GWK91_05950
Prokaryotic type
GWK91_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
QHS22521
UniProt:
A0A6B9YCQ8
LinkDB
All DBs
Position
complement(1159564..1160253)
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AA seq
229 aa
AA seq
DB search
MKQILQNDWNDYLSGEFEKHYYQQLREFLKQEYTSATVFPDMHDIFNAFHYTPYQNTKVV
ILGQDPYHGPDQAHGFSFSVQPSVQIPPSLSNIYKELHQDLGCTIPNHGYLIHWARQGVL
LLNAVLTVRAHQANSHRGKGWEYFTDKVIDVLNEREQPIVFILWGRNAQEKSKYLNQDKH
YIIKSPHPSPLSAHRGFFGSKPFSRANQYLKSMGETPIDWQIPDIGSFS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagatcttacaaaatgactggaacgattatttaagcggagaatttgaaaaacat
tactaccagcaattacgggagtttttgaaacaggaatacacatctgcaacggtatttcct
gacatgcacgatattttcaacgcctttcattatacgccttatcaaaatacgaaagtagta
attttgggacaggacccttatcatggacctgatcaggctcacggcttcagtttttcggta
caaccatccgtgcagattcctccttctttaagcaacatctacaaggagcttcatcaggat
ttaggctgtacaatcccgaatcatggctatttaattcactgggccaggcagggggttctt
ttattaaatgcggtcctgactgtacgggcccatcaggcgaattctcatcgggggaaaggc
tgggagtattttacggacaaagtgattgatgtactgaatgagcgggagcagcccatcgta
tttattttatggggaagaaatgcacaggaaaaaagcaaatatctgaatcaggataagcat
tatattataaaatccccgcatcccagcccattgtcggctcatcgtggtttttttggcagt
aagcctttttcaagagctaatcagtacttaaaatcgatgggggaaacaccaatagattgg
caaattcctgatataggttcattttcttag
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