Virgibacillus sp. MSP4-1: GWK91_05970
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Entry
GWK91_05970 CDS
T06398
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vim
Virgibacillus sp. MSP4-1
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vim03400
]
GWK91_05970
DNA repair and recombination proteins [BR:
vim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GWK91_05970
Archaeal homologous recombinant proteins
GWK91_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
T2SSE
AAA_16
zf-ISL3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHS22525
UniProt:
A0A6B9YCN2
LinkDB
All DBs
Position
complement(1163118..1166231)
Genome browser
AA seq
1037 aa
AA seq
DB search
MRAITLKMSAFGPYKDEQVIDFSQMGEEKLFLITGPTGAGKTTVFDAMCFALYGRASGDD
RDHDTLRSHFAGVDQQTEVSFRFQLHQKEFEIVRAPKQLKRKARGEGYTEQPPQAEIYQI
IDGDRHLLYGKVKEVNEAVEEMLQLDYEQFRKMVMIPQGEFRRLISENSKEREEILQKIF
HTYFYEQMTKRLAEESKSIQHQLEQIENQEQQEISYINWPEDYNIDHPDSKQAKKNLLIL
IENTEKVIHQQEKELQEKRQQQQNSQDKYYQAKELQTLFEEHDQRKEELNELNAKQREID
NQKQKLKQAKAAASIKPYEQQAKVRQDELKKLENDLSLKKEEQRQIHKSYNRIEKEYKIT
KEEEPQREKLRESIRSIKEQLEKVKQAEELEKQKKELANAYHAEKPKLDQTDQRIEQLEK
EIEKSDEDITRSQQLTEQFYEFNAKLKEFEQILMKADKLQQENEQLNKYRIQYRNVLKEY
ENDERYVEQLREELRKLEDAQRNEKAALLASELTDGEACPVCGSLHHPQKAEFNHTSISD
EMINSKRTQLQQREQKYKQLQKEYVDIKSQGTSQNQTVEHLQQELEALSGVKVDLKEFDQ
HIKEWTHEKEGISTKRHELDKQLKELKQKQEKRNLLKEELNKAKKDQQHKHEALQNLKEQ
GVKIQSQLESVRAGLENPVDDYQVVQERLFKTEYEYEKRMNKWDELQKDYEKIKEQKQTL
DVKVESVQNQLQTAQATYQEAEQSFLSELKEKDFVTVEHYEQAKMAEADMERSEEQIRAF
EEKVSITKSRYDQLSVQLKEKERPDLETLENTLKQMNEEIDAKTKHIQDQQLQLDRHLSA
SNRLHQLAEEKQELEETYFDIGELAKLSRGDNQLRLSFERYVLSSFLDEILFQANIRLDQ
MTDHRYQLRRSDRVAKRGAQSGLDIEVIDHYTGQNRSVKTLSGGEGFKAALSLALGMADV
VQAHSGGVELDTLFIDEGFGTLDELSLEQALNCLSDLQKGNRMLGIISHVQKLKEEIRAK
LHIEPSHSGSKVSLTVF
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcaatcacactgaaaatgtctgcatttggaccatacaaggacgaacaggtgatt
gacttctctcagatgggggaagaaaagctctttctgatcacaggtcctacaggggccgga
aaaaccacggtctttgatgccatgtgttttgctctatacggaagggcaagcggagatgat
cgtgaccatgatacattgagaagtcactttgccggtgtggatcagcagacggaggtttct
tttcgttttcaattgcatcaaaaagagtttgaaattgtccgtgctcccaaacagttgaaa
cgtaaagctcgtggagaaggatacacggagcagccaccacaggcggaaatctatcagatc
attgatggagacaggcatttgctttacggaaaggtaaaagaggtcaatgaagctgtagag
gaaatgcttcaactggattatgaacagtttcggaaaatggtgatgattccccagggcgaa
ttccgccggctgatctctgagaatagtaaagaacgggaagaaattttgcagaagatcttt
catacctatttttatgaacaaatgacgaagcgcttagcggaagaaagtaaaagtattcag
catcagcttgagcaaattgaaaatcaggagcagcaggaaatttcatatatcaactggcct
gaagactataatatagatcatcccgattcaaaacaggcgaagaagaatctccttatcctt
attgaaaacacagagaaagtgattcatcaacaggaaaaagagctgcaggaaaaacgacaa
caacagcaaaacagtcaggataagtattatcaggcaaaagaactgcagacactttttgag
gaacatgatcagcgtaaagaggaacttaatgaattaaacgcaaagcagagagaaatcgat
aaccaaaagcaaaaattaaagcaggccaaagctgcagccagcatcaagccctatgaacag
caggcaaaggtacgtcaggatgagctgaaaaaacttgagaacgatctaagtttaaagaag
gaagaacagcgtcaaattcataaatcttataatcggatagagaaggaatataaaattaca
aaagaagaagaaccgcaacgggaaaagttaagagaatccattcgttctatcaaggaacag
ctggaaaaggtaaaacaggctgaagaattggaaaaacagaagaaagaactggctaatgcg
tatcatgcagaaaagcctaagcttgatcagaccgatcagagaattgaacaactggaaaaa
gagattgagaaatccgatgaagacatcacccgatcgcagcagcttacagagcagttctat
gaatttaatgccaaacttaaggaatttgagcaaattcttatgaaagctgataaacttcag
caggaaaatgaacagttaaacaaatatcgtattcagtatcgtaatgttttgaaagaatac
gagaatgatgagcgctatgttgaacagttacgagaggaattacggaagcttgaagatgct
cagcgaaacgaaaaggcagctctccttgcttcagaactgacagatggcgaggcctgtccc
gtttgtggatctctccatcacccgcaaaaggcggaatttaatcatacttccattagtgat
gaaatgatcaattccaagcgaacacagctgcagcaaagagagcaaaagtataagcaactc
cagaaagaatatgtagatattaaatctcagggtacctcacaaaaccagacagtagaacat
ttacagcaggaacttgaggctttatccggagtgaaagtggatttgaaggaatttgatcag
catattaaggaatggacacatgaaaaagaaggtataagtacaaaacgccatgaattggac
aaacaattaaaagaattaaagcaaaagcaggaaaaacgaaacctgctaaaagaagagtta
aataaggcaaaaaaagatcagcagcataagcatgaagccctgcaaaatctgaaagaacag
ggagttaaaatccagtcccagcttgaaagcgtaagagcaggacttgaaaatcctgtagac
gattaccaagtggtacaggaacgacttttcaagacagaatatgagtatgagaaacggatg
aataaatgggatgagctgcaaaaggattatgaaaaaatcaaagagcaaaaacagacactg
gatgtaaaagtcgagtccgtgcaaaatcaattacagacggctcaggctacttatcaggaa
gcagaacaaagctttctgagtgaattaaaagaaaaagatttcgtgacagttgaacattat
gaacaggcgaaaatggctgaagcagacatggaaagatcagaggaacagattagagcattt
gaagaaaaagtttcgatcacaaaaagtcgttacgaccagctttccgttcagctgaaagaa
aaagaacgtcctgacctggaaaccctggaaaatacgttaaagcagatgaatgaagaaatt
gatgccaaaaccaaacatattcaggatcagcagctgcagctggaccggcatctttcagcc
tccaatcgactgcatcagctggctgaggaaaaacaggaattagaggaaacgtattttgat
attggggaattggcgaaactctcaagaggagacaaccaattgcgcctttcctttgaacgt
tatgtattatcctcctttttggatgaaattttattccaggccaatattcgtctggatcag
atgaccgatcaccgataccagctaagaaggagtgaccgtgttgctaaacgtggtgcccaa
agcggtctggatattgaagtgattgaccattacacaggtcaaaatcgttcggttaaaacc
ttatccggaggagaaggatttaaagcagcattaagccttgctcttggaatggccgatgtc
gtacaggcgcattccggtggtgtggagcttgacaccctctttattgatgaaggatttgga
acccttgatgaactttcactggagcaggcgttaaattgcttaagtgatctgcaaaaaggc
aatcggatgttaggaatcatttctcacgtacagaaattaaaagaagaaataagggccaaa
cttcatatagaaccttcacacagcggttctaaggtgtcacttaccgtgttttaa
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