Entry |
|
Name |
(GenBank) AAA family ATPase
|
KO |
K03546 | DNA repair protein SbcC/Rad50 |
|
Organism |
vim Virgibacillus sp. MSP4-1
|
Brite |
KEGG Orthology (KO) [BR:vim00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:vim03400]
GWK91_05970
DNA repair and recombination proteins [BR:vim03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GWK91_05970
Archaeal homologous recombinant proteins
GWK91_05970
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1163118..1166231)
|
AA seq |
1037 aa
MRAITLKMSAFGPYKDEQVIDFSQMGEEKLFLITGPTGAGKTTVFDAMCFALYGRASGDD
RDHDTLRSHFAGVDQQTEVSFRFQLHQKEFEIVRAPKQLKRKARGEGYTEQPPQAEIYQI
IDGDRHLLYGKVKEVNEAVEEMLQLDYEQFRKMVMIPQGEFRRLISENSKEREEILQKIF
HTYFYEQMTKRLAEESKSIQHQLEQIENQEQQEISYINWPEDYNIDHPDSKQAKKNLLIL
IENTEKVIHQQEKELQEKRQQQQNSQDKYYQAKELQTLFEEHDQRKEELNELNAKQREID
NQKQKLKQAKAAASIKPYEQQAKVRQDELKKLENDLSLKKEEQRQIHKSYNRIEKEYKIT
KEEEPQREKLRESIRSIKEQLEKVKQAEELEKQKKELANAYHAEKPKLDQTDQRIEQLEK
EIEKSDEDITRSQQLTEQFYEFNAKLKEFEQILMKADKLQQENEQLNKYRIQYRNVLKEY
ENDERYVEQLREELRKLEDAQRNEKAALLASELTDGEACPVCGSLHHPQKAEFNHTSISD
EMINSKRTQLQQREQKYKQLQKEYVDIKSQGTSQNQTVEHLQQELEALSGVKVDLKEFDQ
HIKEWTHEKEGISTKRHELDKQLKELKQKQEKRNLLKEELNKAKKDQQHKHEALQNLKEQ
GVKIQSQLESVRAGLENPVDDYQVVQERLFKTEYEYEKRMNKWDELQKDYEKIKEQKQTL
DVKVESVQNQLQTAQATYQEAEQSFLSELKEKDFVTVEHYEQAKMAEADMERSEEQIRAF
EEKVSITKSRYDQLSVQLKEKERPDLETLENTLKQMNEEIDAKTKHIQDQQLQLDRHLSA
SNRLHQLAEEKQELEETYFDIGELAKLSRGDNQLRLSFERYVLSSFLDEILFQANIRLDQ
MTDHRYQLRRSDRVAKRGAQSGLDIEVIDHYTGQNRSVKTLSGGEGFKAALSLALGMADV
VQAHSGGVELDTLFIDEGFGTLDELSLEQALNCLSDLQKGNRMLGIISHVQKLKEEIRAK
LHIEPSHSGSKVSLTVF |
NT seq |
3114 nt +upstreamnt +downstreamnt
atgcgggcaatcacactgaaaatgtctgcatttggaccatacaaggacgaacaggtgatt
gacttctctcagatgggggaagaaaagctctttctgatcacaggtcctacaggggccgga
aaaaccacggtctttgatgccatgtgttttgctctatacggaagggcaagcggagatgat
cgtgaccatgatacattgagaagtcactttgccggtgtggatcagcagacggaggtttct
tttcgttttcaattgcatcaaaaagagtttgaaattgtccgtgctcccaaacagttgaaa
cgtaaagctcgtggagaaggatacacggagcagccaccacaggcggaaatctatcagatc
attgatggagacaggcatttgctttacggaaaggtaaaagaggtcaatgaagctgtagag
gaaatgcttcaactggattatgaacagtttcggaaaatggtgatgattccccagggcgaa
ttccgccggctgatctctgagaatagtaaagaacgggaagaaattttgcagaagatcttt
catacctatttttatgaacaaatgacgaagcgcttagcggaagaaagtaaaagtattcag
catcagcttgagcaaattgaaaatcaggagcagcaggaaatttcatatatcaactggcct
gaagactataatatagatcatcccgattcaaaacaggcgaagaagaatctccttatcctt
attgaaaacacagagaaagtgattcatcaacaggaaaaagagctgcaggaaaaacgacaa
caacagcaaaacagtcaggataagtattatcaggcaaaagaactgcagacactttttgag
gaacatgatcagcgtaaagaggaacttaatgaattaaacgcaaagcagagagaaatcgat
aaccaaaagcaaaaattaaagcaggccaaagctgcagccagcatcaagccctatgaacag
caggcaaaggtacgtcaggatgagctgaaaaaacttgagaacgatctaagtttaaagaag
gaagaacagcgtcaaattcataaatcttataatcggatagagaaggaatataaaattaca
aaagaagaagaaccgcaacgggaaaagttaagagaatccattcgttctatcaaggaacag
ctggaaaaggtaaaacaggctgaagaattggaaaaacagaagaaagaactggctaatgcg
tatcatgcagaaaagcctaagcttgatcagaccgatcagagaattgaacaactggaaaaa
gagattgagaaatccgatgaagacatcacccgatcgcagcagcttacagagcagttctat
gaatttaatgccaaacttaaggaatttgagcaaattcttatgaaagctgataaacttcag
caggaaaatgaacagttaaacaaatatcgtattcagtatcgtaatgttttgaaagaatac
gagaatgatgagcgctatgttgaacagttacgagaggaattacggaagcttgaagatgct
cagcgaaacgaaaaggcagctctccttgcttcagaactgacagatggcgaggcctgtccc
gtttgtggatctctccatcacccgcaaaaggcggaatttaatcatacttccattagtgat
gaaatgatcaattccaagcgaacacagctgcagcaaagagagcaaaagtataagcaactc
cagaaagaatatgtagatattaaatctcagggtacctcacaaaaccagacagtagaacat
ttacagcaggaacttgaggctttatccggagtgaaagtggatttgaaggaatttgatcag
catattaaggaatggacacatgaaaaagaaggtataagtacaaaacgccatgaattggac
aaacaattaaaagaattaaagcaaaagcaggaaaaacgaaacctgctaaaagaagagtta
aataaggcaaaaaaagatcagcagcataagcatgaagccctgcaaaatctgaaagaacag
ggagttaaaatccagtcccagcttgaaagcgtaagagcaggacttgaaaatcctgtagac
gattaccaagtggtacaggaacgacttttcaagacagaatatgagtatgagaaacggatg
aataaatgggatgagctgcaaaaggattatgaaaaaatcaaagagcaaaaacagacactg
gatgtaaaagtcgagtccgtgcaaaatcaattacagacggctcaggctacttatcaggaa
gcagaacaaagctttctgagtgaattaaaagaaaaagatttcgtgacagttgaacattat
gaacaggcgaaaatggctgaagcagacatggaaagatcagaggaacagattagagcattt
gaagaaaaagtttcgatcacaaaaagtcgttacgaccagctttccgttcagctgaaagaa
aaagaacgtcctgacctggaaaccctggaaaatacgttaaagcagatgaatgaagaaatt
gatgccaaaaccaaacatattcaggatcagcagctgcagctggaccggcatctttcagcc
tccaatcgactgcatcagctggctgaggaaaaacaggaattagaggaaacgtattttgat
attggggaattggcgaaactctcaagaggagacaaccaattgcgcctttcctttgaacgt
tatgtattatcctcctttttggatgaaattttattccaggccaatattcgtctggatcag
atgaccgatcaccgataccagctaagaaggagtgaccgtgttgctaaacgtggtgcccaa
agcggtctggatattgaagtgattgaccattacacaggtcaaaatcgttcggttaaaacc
ttatccggaggagaaggatttaaagcagcattaagccttgctcttggaatggccgatgtc
gtacaggcgcattccggtggtgtggagcttgacaccctctttattgatgaaggatttgga
acccttgatgaactttcactggagcaggcgttaaattgcttaagtgatctgcaaaaaggc
aatcggatgttaggaatcatttctcacgtacagaaattaaaagaagaaataagggccaaa
cttcatatagaaccttcacacagcggttctaaggtgtcacttaccgtgttttaa |