Virgibacillus sp. MSP4-1: GWK91_06350
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Entry
GWK91_06350 CDS
T06398
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vim
Virgibacillus sp. MSP4-1
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vim03032
]
GWK91_06350
03036 Chromosome and associated proteins [BR:
vim03036
]
GWK91_06350
03400 DNA repair and recombination proteins [BR:
vim03400
]
GWK91_06350
DNA replication proteins [BR:
vim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GWK91_06350
Chromosome and associated proteins [BR:
vim03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GWK91_06350
DNA repair and recombination proteins [BR:
vim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GWK91_06350
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
Rpf1_C
HU-CCDC81_euk_2
HU-DNA_bdg
Glycos_trans_3N
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QHS22591
UniProt:
A0A6B9YCX4
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Position
complement(1229943..1230215)
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AA seq
90 aa
AA seq
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MNKTELVNAVAEKGDLSKKDAAQAVDAVFESITDSLTDGDKVQLIGFGNFEVRERAARKG
RNPQTGDEIEIPASKVPAFKPGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagaactcgtaaatgcagttgctgaaaaaggcgatctttctaaaaaggat
gcagctcaggctgtagatgcagtatttgaatccattactgattccttaactgacggagat
aaagtccagcttatcgggtttggtaactttgaggttcgcgagcgtgcggctcgtaaagga
cgtaatccacaaactggtgatgagattgaaattccagccagcaaagtacctgcattcaaa
cctggtaaagcccttaaggatgctgtgaaataa
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