KEGG   Virgibacillus sp. MSP4-1: GWK91_06350
Entry
GWK91_06350       CDS       T06398                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
vim  Virgibacillus sp. MSP4-1
Brite
KEGG Orthology (KO) [BR:vim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vim03032]
    GWK91_06350
   03036 Chromosome and associated proteins [BR:vim03036]
    GWK91_06350
   03400 DNA repair and recombination proteins [BR:vim03400]
    GWK91_06350
DNA replication proteins [BR:vim03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GWK91_06350
Chromosome and associated proteins [BR:vim03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GWK91_06350
DNA repair and recombination proteins [BR:vim03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GWK91_06350
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 Rpf1_C HU-CCDC81_euk_2 HU-DNA_bdg Glycos_trans_3N HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QHS22591
UniProt: A0A6B9YCX4
LinkDB
Position
complement(1229943..1230215)
AA seq 90 aa
MNKTELVNAVAEKGDLSKKDAAQAVDAVFESITDSLTDGDKVQLIGFGNFEVRERAARKG
RNPQTGDEIEIPASKVPAFKPGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaacagaactcgtaaatgcagttgctgaaaaaggcgatctttctaaaaaggat
gcagctcaggctgtagatgcagtatttgaatccattactgattccttaactgacggagat
aaagtccagcttatcgggtttggtaactttgaggttcgcgagcgtgcggctcgtaaagga
cgtaatccacaaactggtgatgagattgaaattccagccagcaaagtacctgcattcaaa
cctggtaaagcccttaaggatgctgtgaaataa

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