Virgibacillus sp. MSP4-1: GWK91_07820
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Entry
GWK91_07820 CDS
T06398
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vim
Virgibacillus sp. MSP4-1
Pathway
vim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GWK91_07820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vim03400
]
GWK91_07820
Enzymes [BR:
vim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GWK91_07820
DNA repair and recombination proteins [BR:
vim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GWK91_07820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
DEAD
UvrD_C
UvrD-helicase
nSTAND3
RsgA_GTPase
TsaE
Mg_chelatase
AAA
SLFN-g3_helicase
NPHP3_N
AAA_16
AAA_28
AAA_29
AAA_12
NTPase_1
Zeta_toxin
AAA_7
LIP
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QHS22857
LinkDB
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Position
complement(1505215..1507542)
Genome browser
AA seq
775 aa
AA seq
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MAMDLVSEEKGYIKGILLRTIFHNAEEKFSIALIRIVDTNEPFDDKEIVVKGHFPPLEQE
QEYIFYGNLYQHNKFGQQYQVFTYTREIPKTKDSLVRYLSSDIFYGVGKKSAQKIVDVLG
ETAIDQILKDENVLAGIPGFPKNVISSFSQTLRENQGFERVVMALADYGIGLQLTQKIYA
VYKEDTLKLLEENPYQFVFEVEGFGFRRADNIAKMIGIAGDHPARIQAGCIHILQKQSQF
GHVYEYLGQLCDDVRKLLNETEPSVTNDLVEQKMIELSEERYLIIEDDRVYLPSLYFSEE
GVSSQLKRIMDVELDGEFVQADILKALGEIEEKETISYGREQYEAIEQALNSKAVILTGG
PGTGKTTVIKGIIGVFERLNSKSNTEENEGSPIVLAAPTGRAAKRMTEATGHKAQTIHRL
LGWSGSEEFEFNQSHQLDADLIIIDEFSMVDIWLANQLFRAIPSKAQIVLVGDEDQLPSV
GPGQVLTDLLSSGVIPTCKLTEIYRQKEGSRIVELAHEIKNHQCDHQSLKKGEDFSFFRS
HGTNTRTLLQDIVKKAVDKGYSIRDIQVLAPMYRSNVGINKLNESLQELLNPANSRKRTL
NFNEQVFRSGDKVIQLVNQPEKGVYNGDIGHAVTILKADETEENQEQLVVDFDGKEVRYV
RSELHQLMHAYCISIHKSQGSEFPIVVMPVVPEFRRMLRKNLLYTAITRSKQSLIICGDQ
RAFLDGVSTEDQNVRHTTLSQRINQMFAGEPISGEIKEEDVEDADEEELSPYDFM
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggatttggtaagtgaggaaaaaggttatataaaagggatactgctccgtacg
atttttcataatgcggaggagaagttttccattgccttaatccggattgtggatacaaac
gaaccatttgatgataaagaaattgttgtgaaaggtcattttccacctcttgaacaggag
caggaatatatattctatgggaatctttatcagcacaacaaatttggacagcaatatcag
gtatttacatatacaagggaaatccccaaaacaaaggatagtctcgtgcgttatttgtcc
agtgacatcttttatggtgtagggaaaaaaagtgcccaaaagatcgtggatgttcttggt
gaaacagccatcgatcaaattttaaaagacgaaaatgtattagcgggcatccccggcttt
cctaaaaatgtgatttcatcctttagtcagacccttcgagaaaatcaagggtttgagcga
gtcgtgatggccttagctgattacgggattgggctccagcttacacaaaaaatttatgcg
gtttataaagaggatacactgaagcttctggaggaaaacccctatcagtttgtgtttgaa
gttgaaggatttgggttcagaagagcggataacattgctaagatgattggtattgcaggt
gaccatccagccagaatacaagctggctgtatccatattttgcaaaaacaatctcaattt
ggtcatgtttatgaataccttgggcagctatgtgatgatgtgcggaaattactgaatgaa
acggaaccgtctgtgacgaatgatctggtagaacagaagatgatagagttatcagaagaa
cggtacctcatcatagaagatgaccgggtctatcttccttccctctatttctcggaagaa
ggagtaagctctcagttaaaaaggattatggatgttgaattggacggggaattcgtacaa
gctgatattttaaaagcgttaggcgaaatagaagaaaaggaaaccataagctatggaagg
gagcaatatgaagctattgagcaggctttaaactcaaaggctgtgattttaaccgggggt
ccaggtacagggaaaacgacggttatcaaaggtattatcggagttttcgagcgactgaat
tcgaaaagcaatactgaggaaaatgagggatctcctattgttctggcagcaccaacaggc
agggcagcaaagcgtatgacagaagcaaccggtcataaagcacaaaccatccaccggttg
ctcggatggtcaggaagtgaagaatttgagtttaatcaaagtcatcaattagatgccgat
ttaatcattattgatgagttttccatggtagatatatggcttgccaaccaactctttcgg
gcgatccccagtaaggcacagattgtgttggtaggtgatgaggaccaattgccctctgta
ggccctggacaggttttgacagatttgctttcttcaggagttattcctacgtgtaaactt
accgaaatatatcggcaaaaagagggctcgagaattgtagagctggctcatgaaattaaa
aaccatcaatgtgatcaccaatccttaaaaaaaggtgaggatttttcctttttccgctca
cacggaacaaatacacgaaccttattgcaggatattgtaaaaaaggctgttgataaggga
tattccataagggatattcaggtacttgcaccgatgtatcgttcgaatgttggaattaat
aaattaaatgagtcgttacaggagctccttaatccggcgaatagccgcaaaagaacgctg
aattttaatgaacaggtgtttcgctcaggtgataaagtgatacagcttgtcaaccaacca
gagaagggtgtatataatggagatataggccatgcggtgacgattctgaaggcagatgaa
acagaggaaaatcaggaacagctggtcgttgactttgatggcaaagaagtccgttatgtt
cgttctgagcttcaccagctcatgcatgcctattgtatatcgattcacaaatcgcagggt
agcgaattcccgattgtggttatgcctgtcgttcctgaatttcggcgtatgcttaggaaa
aaccttttatatacggcgattacaagaagtaagcagtcactaattatttgtggagatcag
cgagcgtttttagacggtgtaagtacagaggaccagaatgtacggcatacaaccctgtcc
caacgtattaatcagatgtttgcaggtgaacccatatcgggtgaaataaaggaagaagat
gtggaggatgcagacgaagaggagttgtctccatatgattttatgtga
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