Virgibacillus sp. MSP4-1: GWK91_09890
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Entry
GWK91_09890 CDS
T06398
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
vim
Virgibacillus sp. MSP4-1
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vim03019
]
GWK91_09890 (rapZ)
Messenger RNA biogenesis [BR:
vim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GWK91_09890 (rapZ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QHS23241
UniProt:
A0A6B9YEK6
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Position
complement(1939288..1940169)
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AA seq
293 aa
AA seq
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MSEQSQKVELVIITGMSGAGKTLAVQSFEDLGYFCVDNLPPALLPKFLELMKENDQRTPK
VAVVMDLRGREFFDTLIDTLVQVGKEDWISEQILFLEADNDVLVSRYKETRRSHPLAPDG
LPLEGIKKERELLDELKGRAQIIIDSSDKKPRKLREEILQAFKDQSQHVFSMNVVSFGFK
HGVPIDADLVFDVRFLPNPHYVESMRPLTGKDTEVAEYVFKWSETDTFMNKLLDMLSFML
PQYKKEGKRQLVVGIGCTGGQHRSVAIAEKIADYFQSEYDTYVTHREIDKKKG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaatcacaaaaagtggaattggtgattataacaggaatgtcaggggcagga
aaaacgttggctgtgcagagctttgaagatttaggttatttttgtgtggataatttaccg
cccgcattgcttccgaagttcctggaattaatgaaagaaaacgaccagcgtacgcctaaa
gtagctgtcgtgatggacctaagaggaagagagttttttgatacattaattgatacatta
gttcaggtcgggaaagaagactggatttctgaacaaatcctcttcctggaggcggataat
gatgtgctggtttcccgctataaagaaacgcgtcgttcccatcctttagctccggatggc
cttcctttagaagggattaaaaaagaacgcgaattactcgatgaactaaagggaagagcg
caaattattatcgattcatctgataaaaaaccacgaaaattgagagaggaaattctgcag
gcgtttaaggatcagtctcagcatgttttctccatgaacgtggtttcctttggatttaag
catggagttccgattgatgccgacctggtgtttgatgttcgctttcttcccaacccccat
tatgtagaatcgatgcgtcctttaacgggaaaggatactgaagttgcggaatatgttttt
aaatggtctgaaacagacacttttatgaataaactgttagatatgctgtcctttatgctc
ccgcaatataaaaaagaggggaagcgtcagttggttgtggggataggctgtacaggcgga
cagcaccgttctgtggctattgccgaaaaaatagccgattatttccaaagcgaatatgac
acatatgtaacgcaccgagagattgacaaaaagaaaggatag
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