Virgibacillus sp. MSP4-1: GWK91_10350
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Entry
GWK91_10350 CDS
T06398
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vim
Virgibacillus sp. MSP4-1
Pathway
vim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWK91_10350 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vim03019
]
GWK91_10350 (recQ)
03400 DNA repair and recombination proteins [BR:
vim03400
]
GWK91_10350 (recQ)
Enzymes [BR:
vim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GWK91_10350 (recQ)
Messenger RNA biogenesis [BR:
vim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GWK91_10350 (recQ)
DNA repair and recombination proteins [BR:
vim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GWK91_10350 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHS23327
UniProt:
A0A6B9YFY3
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All DBs
Position
2046474..2048276
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AA seq
600 aa
AA seq
DB search
MLNEATNVLNNTFGYTEFRTGQKDIIQQMLDQQNTLGIMPTGGGKSLCYQIPALVLSGTA
IIISPLISLMKDQVDALHAHGISATFINSSLTVQEIDQRLADIQAGTYKMVFVAPERFES
RYFLQTIQDTEISLMAFDEAHCISQWGHDFRPSYRSIIPVLKELNQRAPLLALTATATKE
VARDITELLDIPRENAVFTTFARENLSFQVIKGGHKRDFILNYIKRRPNQSGIIYTSTRK
ETDQLYEFLRKQNFSVAKYHAGLSEEEKKEGQEQFILDNILIMVATNAFGMGIDKSNVRF
VIHYNMPRNIESYYQEAGRAGRDGEDSECYLMFSPQDVQIHKFLIEESNLNETQRTQEYA
RLQQMVQYCHTESCLQSYVLEYFDDPSSFHRCEKCSNCTDQREQVDMTKEAQMIFSCIKR
MNERFGVTLVAQVLKGSKNKRMRELGFHKLSTYGLMKNRREMEIVELVNYLLAEGYLKLT
DGKYPVVQLTQNVLPILKGEAKVYKKMTIVKQQQTEGDEELFEQLRTLRKQLADDEGVPP
YVVFSDATLKEMTMYYPEDQNRLLAIKGVGQAKLDKYGEIFIEAIQSYVSEKDRDAVSKS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacgaagcaacaaacgtattaaataatacatttggatacaccgagttccgaacc
ggacaaaaagatattattcagcaaatgctggatcagcaaaacacgctcggcattatgcca
acaggcggcggaaagtccctgtgctatcaaatcccggccttagttctttcgggcacagct
atcataatatcccctctgatttcccttatgaaagatcaggtggatgccctgcatgcccat
ggaatctcagctacatttattaacagcagcctgacggtccaggaaatcgatcaacgtctg
gcggacatccaggccggtacgtataaaatggtgtttgtggccccggaacgatttgaatct
cgctattttctgcagaccattcaggatacagaaatttccttaatggcctttgatgaagcc
cattgtatttcccagtggggtcacgatttccggcccagctaccggtcgattattccggtt
ctcaaagaactgaatcagcgtgcgcctctccttgccctgacagcaacggcaacaaaagag
gtcgcccgggatattaccgaattactcgacatcccacgtgaaaatgccgtgtttacaacc
tttgcaagggaaaatctgtcttttcaggttatcaaaggtggccataaacgggattttatt
cttaattatatcaaaagacgtcccaatcaatcaggcattatttatacttccacccgaaaa
gaaaccgatcagctctatgaattcctccgtaagcaaaatttttctgttgcgaaatatcat
gcaggactttcagaagaggaaaagaaagaaggccaggagcagtttattctcgataacatt
ttgattatggtagcgacaaatgcttttggtatgggcattgataaatccaatgtacggttt
gtgatccactacaacatgccccggaatattgaatcctattatcaggaggctggcagggct
ggaagagacggggaggatagtgagtgctatctgatgttttccccgcaggacgttcaaatc
cataaatttttaattgaggagagcaatctaaacgagacgcagcggacacaggaatacgcc
cgccttcagcaaatggtgcagtattgccatactgaaagctgcctgcagtcctatgtgctg
gagtatttcgatgatccaagttcgttccatcgatgcgaaaaatgcagcaactgcaccgat
caacgggagcaggtcgacatgacgaaagaagcccagatgatcttttcctgtattaaacga
atgaacgaaagattcggggttaccctcgttgcccaggtattaaaagggtccaaaaataaa
cgcatgcgagagctcggctttcacaagctttccacatacgggctgatgaaaaatcgccgg
gaaatggaaattgtggagctggtcaattatttactggcggaaggatatttaaaattaacc
gatgggaaatatccggttgtccagctgactcaaaatgtcctccctatccttaaaggggaa
gccaaggtttataagaaaatgaccattgtcaaacaacagcagacagaaggcgatgaggag
ctctttgaacaattacggactcttcggaaacagctggcggatgacgaaggggttccacct
tatgtcgttttttcagatgcaaccctaaaggaaatgacgatgtactaccctgaggaccaa
aaccggttgctggcgattaaaggggtaggacaggccaagcttgataaatatggagaaatc
tttatagaagccatccagtcctatgtctcggaaaaggatagggatgcagtcagcaaatcg
taa
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