Virgibacillus sp. MSP4-1: GWK91_10595
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Entry
GWK91_10595 CDS
T06398
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vim
Virgibacillus sp. MSP4-1
Pathway
vim03420
Nucleotide excision repair
vim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GWK91_10595
03430 Mismatch repair
GWK91_10595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vim03400
]
GWK91_10595
Enzymes [BR:
vim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GWK91_10595
DNA repair and recombination proteins [BR:
vim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GWK91_10595
MMR (mismatch excision repair)
Other MMR factors
GWK91_10595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QHS23374
UniProt:
A0A6B9YES4
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Position
complement(2103165..2105387)
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AA seq
740 aa
AA seq
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MNSRDSYFFDRKSAELGVVLNKVQKQAVLHTKGPLLLLASPGSGKTTTIIMRIGYLIEIQ
KADPSRIKAVTFSKASAHDMKERFQQFFPDLPSVHFSTIHSLAFQVVREYFHRQGIRYEL
IEGQGERNKKQILRKIYQSVHEETITEDQLEALTTYISYIKNRLIPEKKWPAIECDVPKA
ADILKQYEDFKKSRSDQLLLDYDDMLTLANDALKTDETLRRKYQQKFDYVLTDESQDTSL
VQHAIIEQLVEEHKNLFVVADDDQSIYMWRAAEPQYLLDFQKVYPEAKILKLEQNYRSSR
EIVDVSNRFIKRNKNRYKKQMFTNNPSREQVELTTLGDYHEQPRYLVDQISLLENFRDAA
ILYRNHSSSIPLIDAFARAGIPFYMKDPDNRFFSHWIVKDVLNFMRLAFDARRTDIFERV
YGKFNWYLSKNHIEQLHRMRNGESVFDNLIRYTRLKDFQKVKIQKGKEIFREMKGMDPGM
AIRSIRNELGYEDVLKDMSKRLGFNKENLFDMLNTLEDIAKSVDSVAGFGKRIKHLDALM
ASSKFNKDEDAVTFSTFHSAKGLEFPRVYMIDLMDGVIPAQSDLESAKDGVYEPLEEAVR
LFYVGMTRAEQHLELVTYQRKYGKKGRPSRFYHDVERIVHPAKVTKEDEKTGKREGTTIT
TSQTRTKKSRIPYDPNAIKERDALQEGMMVKHRVFGRGEIVSCSEEIIEIRFPKFSKQLS
VEKCLEMGLLGACHHPNFVE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagagattcgtatttttttgatagaaagagtgctgaactgggggttgtgcta
aataaggtccaaaagcaggcggttttacatacaaagggtccgctcctgctgctggcgtcc
ccgggttcagggaaaacgacaacgattattatgagaattggctatttaatagagattcaa
aaggccgatccttcccgcataaaggctgttacgttcagtaaggcttcggcccatgatatg
aaagagcggtttcagcagttttttcccgatcttccttctgttcatttttctactatacat
agtttggcttttcaggtcgtgagggagtattttcatcggcagggaatccggtatgagctc
attgaagggcagggggagcggaataagaagcaaattctgcggaaaatttatcagtctgtc
cacgaggagaccataacggaggaccagctggaggcgctcactacttatatcagttatatt
aaaaatcgccttatccctgagaaaaagtggccggccatcgaatgtgatgtgccgaaagcc
gcagatattttaaaacagtacgaggactttaaaaaatcccgctctgaccaattgctgctt
gattatgacgatatgcttactctggcgaatgatgcgctgaaaacggacgagacgctgcgg
aggaaataccagcagaaatttgattatgtactcactgatgaaagtcaggatacgtcactg
gttcagcatgccatcattgagcagcttgtggaggagcacaaaaatttatttgtcgttgcc
gatgatgatcagtcgatttatatgtggcgggcggccgagcctcaatacctgcttgatttt
caaaaagtgtatccggaagcgaaaattcttaagcttgagcaaaattaccgctccagccgg
gagattgtggatgtctcgaacaggttcattaagcgcaacaaaaatcgctataaaaaacag
atgtttacgaacaatccttcccgtgaacaggttgagctgactacgctaggggattatcat
gagcagccgcgctatctggtagatcaaatttctctgcttgaaaactttcgggatgcagcg
atattataccggaaccattcgtcctcgattcctttaattgatgcgtttgcccgggccgga
attcctttttatatgaaggatcctgacaaccggtttttcagccattggattgtgaaagat
gtcctgaattttatgcgactcgcttttgacgccaggcggacggatattttcgaaagggtg
tatggaaagtttaactggtatttatcgaaaaaccatatagagcagcttcatcgaatgcgg
aacggtgaatcggtgtttgacaacctgattcgttatacccgtttgaaagattttcagaag
gtgaagattcaaaagggaaaagagatttttcgtgaaatgaaggggatggatccgggaatg
gcaatccgctctatacgtaatgagcttgggtatgaagatgtcttgaaggatatgagtaag
cggctcggttttaataaggaaaatctgtttgatatgctgaacactctggaggacattgcc
aaatcggtggacagtgtggcggggttcgggaaacggatcaaacacctggatgccctgatg
gcttcctcaaagtttaataaggatgaggatgccgtaacgttttccacctttcatagtgcg
aaggggctggaatttccaagggtgtatatgattgatttgatggatggagtgattccggcg
cagtctgatctggaaagtgcaaaggatggggtatacgaaccgctggaggaagcagtccgg
cttttttatgttggcatgacccgggccgagcagcatctggagcttgtaacctaccagcgc
aagtacgggaaaaaagggcgaccgtcacgcttctatcatgatgtggagcggattgtacat
ccagctaaggttactaaggaagatgagaagacagggaagagggaaggcacgacaatcacg
acaagccagactcgcaccaaaaagagcagaatcccttatgacccgaatgcgataaaagag
cgggatgctttgcaggaagggatgatggtcaagcaccgagtctttggccggggtgaaatc
gtgtcttgcagcgaggaaattatagaaatccgctttccgaaattttcaaaacagttatcc
gttgaaaagtgtttggagatgggactcttaggtgcctgtcaccacccgaattttgtcgaa
taa
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