Virgibacillus sp. MSP4-1: GWK91_12365
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Entry
GWK91_12365 CDS
T06398
Name
(GenBank) helicase SNF2
Organism
vim
Virgibacillus sp. MSP4-1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
MptE-like
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QHS23696
UniProt:
A0A6B9YFP9
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Position
2527375..2530644
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AA seq
1089 aa
AA seq
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MKNMMDLNKGMFTQSVYRRGLQYYNQGRVGQFTHYADEHSWRTAVFGTEVYDVEIQFTNN
GISYFCECPAHETYHSCKHTVAAFLELADVIQDPIDREALHQFLGQFESDISFRRRRMSR
QRPDPATEMIKLFSDYIETSDTTNEPSMIARPLKCEYIIKTHQRIWDSPLLTVEIKIGEQ
RTYVVKKIRELLSHIQQQKELIFTKKFTYDPKIHYFKQEDQEIIQLLMEIYTSESFYQGS
RNLQYGYIDPREMVIPPLHADRLLQMLQHRDCQFKGETGTYTEFYRSDEELPFTFELDQN
QQASGYNLDLHFLNSAVILDDYQFVLSGNIFYKVDQKQLGILNEMGKIVNLTHNRTLPIK
KEQIESFLSHVMPSLNQIGDLQIKEQISNDIIQPPLQAKLYLDIDEEHLTARLEYHYEDY
TFYPFGNYKDERQESNQILIRDMEKEQEVMNIIETAPFKYNGNELYIDEEDEIFSFLYDV
LPKLEDKIAIYTTNQIKQMMLEERQYPDIQIDLDANENFLEINFDFEDIHPDEIQHIFQS
ITEKKRYYRLPNGTFVPLEDDAFTPISKLMNELNINPENMDEGQITVPAYRGMQVEEYMN
KEIGAKYNKAFRQLLRDIKTPDESEYTLPENLNADLREYQNVGYQWLKGLSHYRFGGILA
DDMGLGKTLQAIAFLLSDWEEKQSENDPALVVAPASLVYNWKSEFSKFAPQLNVVVVSGS
RDERRGKLEKATEADVLVTSYPSLRQDIEVYQPMTFSTMILDEAQAIKNHLTKTAKAVKS
IVASKRFALSGTPIENSLDELWSIFDCLMPGFFPNKKTFNTLPQEQISRMSRPFILRRLK
QDVLKELPDKIETVHTSELTKEQKQLYLGYLERIQGEAANAIAAEGFQKNRMKILAGLTR
LRQLCCHPSLFIEDYQGESGKLNQLLEIVENARENNQRMLIFSQFSSMLQIIQQKLTDAG
MDAFYLDGQTPSKERVEMAERFNQGEKEIFLISLKAGGTGLNLTGAATVILYDLWWNPAI
EEQAAGRAHRIGQKKVVQVFRLITEGTIEEKIYSLQQKKRELIENVIQPGETMFKSLSEE
EIKELLSMN
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatgatggacttaaacaagggaatgtttacccagtctgtttatagaagagga
ctgcaatattataatcagggccgtgttggtcaattcactcattacgctgacgaacacagc
tggcgtacggccgtttttggcacggaagtttatgacgtggaaatccaatttacaaataac
ggaatctcctatttttgtgagtgcccagctcatgaaacctatcattcctgcaaacatacc
gttgcagcttttttagagctggctgatgtgattcaagatccaattgatagagaagccctt
catcagtttcttggacaatttgaaagtgacatttcgttcagaagaaggagaatgagccgt
caacggcctgatccggctacagaaatgattaaactgttctcggattatattgaaacatct
gatacgacaaacgagccatccatgattgccagaccgttaaaatgtgaatatattataaaa
acccatcaaagaatttgggactctcctctgctaacggttgaaattaaaattggtgaacaa
agaacttatgtagtcaagaaaatccgtgagctgctcagccacattcaacagcaaaaagag
cttattttcacaaaaaagttcacctatgatcctaaaattcattacttcaagcaggaagat
caggagattatccagctattaatggagatctacacaagcgaaagcttctatcagggatca
cggaatttacaatacgggtacatcgatccaagggaaatggtcattcctcctctgcatgcg
gaccgtctgctacaaatgctgcagcatcgggactgtcaattcaaaggcgaaacagggacc
tatacggaattttatcggtcagatgaggaacttccttttacttttgagcttgaccaaaac
cagcaggcaagcgggtacaaccttgacttacatttcctgaactctgcggtcattttagac
gattatcaatttgttctttccggcaatattttctataaggttgatcaaaagcagctcggg
attttaaacgaaatgggtaaaattgtaaacctgacgcataaccggactttgcctattaaa
aaggagcaaatagagtccttcctatctcacgtcatgcccagcctgaatcaaattggtgat
cttcagattaaagaacaaatctcaaacgacattatccagccgcctctccaggcaaagctg
tatcttgatattgatgaggagcacctgaccgcccggcttgaatatcattatgaggattat
accttctatccgttcggcaattataaggatgaacggcaggaatccaatcagattttaatt
cgcgatatggagaaagagcaggaagtgatgaacatcatcgaaactgcgccttttaaatat
aacggaaatgaattatacattgatgaggaagatgagattttttcctttctttatgatgta
ctccctaagcttgaggacaaaatcgcgatttatacaaccaatcagatcaaacaaatgatg
ctggaggaacgacaatatcctgatatccagattgatctggatgcaaatgaaaacttcctg
gaaattaactttgattttgaagatattcatcctgatgaaattcagcatatctttcagtcc
attacggagaaaaagcgatactatcgcctgcctaatggtacatttgtccctcttgaggat
gacgcctttactccgatttccaagctgatgaatgagctgaatataaatcccgaaaatatg
gatgaaggccagattaccgttcctgcttaccgggggatgcaggttgaagaatacatgaac
aaggaaattggggccaagtacaataaggccttccgccagttactgcgggatattaaaacc
ccggatgaaagtgaatatacgctgccggagaatttaaatgccgacttgcgtgagtatcag
aatgtcggttatcaatggctgaaggggctgagtcattatcgctttggcggaattttagcg
gatgatatggggcttggtaaaacgctacaggcgattgcctttctattatccgactgggag
gagaagcaatcagaaaacgatccggctctcgtggtcgcacctgcctcactcgtctataac
tggaaaagcgaattttccaagtttgcgccacaactaaatgtggttgtcgtgagtggcagc
agagatgaacgaagaggaaagctggaaaaggccacagaagcggacgtcctggtgacttcc
tacccttcgttaagacaggatatagaagtctaccagcctatgaccttttcgacgatgatt
ctggacgaggcccaggcgattaaaaaccatttaaccaaaacggctaaagcagtaaaatcg
atcgttgcttcgaagcgatttgctcttagcggaacaccaattgagaattcgctggatgag
ctatggtctatttttgattgcttaatgcccggatttttcccgaataaaaagacctttaat
acactgccacaggagcaaatttccagaatgagcagaccctttatcctgcgccgtctgaag
caggatgtattaaaagaacttccggacaagatcgaaacggttcacacctccgaattaaca
aaagagcaaaagcagctttacctcggttatttagaacgaatacagggggaagcggccaat
gccattgcagcagaaggatttcaaaagaaccggatgaaaatcctggccggtctaaccagg
ctgcgtcagctgtgttgccacccatccttgtttattgaggattatcagggtgaatcaggc
aagctcaatcagctgctggaaatcgtcgaaaatgcccgggaaaacaaccagcgaatgctt
atcttttcccaattctcaagcatgctgcaaattattcagcaaaagcttaccgatgccgga
atggatgccttttatctggatggacaaacaccttccaaagaacgggtggaaatggccgag
cgctttaaccagggagaaaaggaaatcttcttaatctctcttaaagcaggcggaaccggc
ctcaacctgacaggagcagccactgtcatcttatatgatctatggtggaatccggccatt
gaagaacaggcagccggccgcgcccatcgcatcggacagaaaaaggtcgttcaggtattc
cgtctgattactgaaggaaccattgaagaaaaaatttactccctgcagcagaaaaaacgg
gaactgattgagaatgtcatacagccgggagaaacgatgtttaagagccttagtgaagag
gaaattaaggaattgctaagtatgaattaa
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