Virgibacillus sp. MSP4-1: GWK91_12545 Help Entry GWK91_12545       CDS       T06398                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism vim  Virgibacillus sp. MSP4-1 Pathway vim03018   RNA degradation Brite KEGG Orthology (KO) [BR:vim00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     GWK91_12545  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vim03019]     GWK91_12545 Messenger RNA biogenesis [BR:vim03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      GWK91_12545 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6 Motif Other DBs NCBI-ProteinID:  QHS23729 LinkDB All DBs Position complement(2577460..2579127) Genome browser AA seq 555 aa AA seqDB search METNRNSLSVYALGGLNEIGKNMYAIEYGNDIVLIDCGNKFPDETLLGIDLIIPDMSYII ENQSRVRALILTHGHEDHIGGVPFFLKTINVPVYATRFTLGLVEIKLQEHRLLRESELIE IHSDSKVQIGDMEISFFKVNHSIPDCLGIVFNMPEGTIVHTGDFKFDLTPANNEQPDIHK MADIGNKGVLLLLSESTNAERPGYTPSEQMVGKNLEQIFIQAKRKVIVSTFASNISRIQQ VVDAAEKTNRKLALLGRSMVNVVKVAMDRGYLVIPKWMLIEARDIDELPPDRVSILCTGS QGEALAALSRLSTGNFRDVEILPEDTIILAAGPIPGNEKKVTSIVDNLYKLGAHVIYGSG SSSGMHVSGHGYQEDLRLMLTLMKPKYFIPIHGEHRMLHHHRMLAESVGVEKGNTFILKN GDVVDLEQSIARSTRNIPSGDTYVDGVDIGDMEFVLRDRKQISEEGMLMAIIPINKHDKK LLSDPEFISRGFVDQNFTELRKEMNRMTKETINELRDTDRGSRNLIKKRVKRTLAKYVKQ HTKKEPMIVPILMDI NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt atggaaacaaaccggaattcattgtccgtttatgctcttggtggattaaatgaaattggg aaaaatatgtacgccatcgaatatgggaacgatattgtactgattgattgtggcaacaag tttcctgatgagacgttattaggcattgatttaattataccggatatgtcctacatcata gaaaatcagagccgagtgcgtgcgctgattcttacacacggtcatgaggatcacattgga ggagtccctttttttctgaaaaccataaatgtgcccgtgtatgcgacacgattcacactg gggcttgttgaaatcaaattacaggaacatcggcttttgcgggaaagtgaattaattgaa atccattctgattcaaaggttcaaattggtgacatggagataagctttttcaaagtgaac catagcattccggattgtttaggaattgtctttaacatgccagaaggaacaatcgtacat acaggggacttcaaatttgatttgacccctgcgaacaatgaacaaccagatattcacaaa atggctgacattggcaataaaggggttctgcttctattatccgaaagtaccaacgctgag cgaccgggttatacaccttctgaacaaatggtagggaaaaatttagaacagatatttatt caggcaaaacgaaaagtcattgtatccacgttcgcttccaatattagtcggatccaacag gttgtcgatgctgctgagaaaaccaatcgaaaactggctttactgggtcgatcgatggtg aacgttgttaaggttgccatggaccgcggctatttagtgattccaaagtggatgttaata gaagcccgtgatattgatgagctgcctccggatagggtaagcattttgtgcaccgggagc caaggagaggccctggcagcccttagtcgcctttccactggtaactttcgtgatgtagag attttacccgaagatacgatcatccttgctgccggtccaattccggggaatgaaaagaaa gtcaccagtattgtcgataacctctataaacttggagctcatgtgatttatggttcagga agcagctcaggcatgcatgtttcaggtcatggttatcaggaggatttacgactcatgcta accctgatgaagcccaagtacttcatacccattcatggtgagcaccgaatgctacatcac catcgaatgctcgcagaatcggtgggggttgaaaaaggcaacacctttattttgaagaac ggggatgttgttgatcttgagcaatccattgcccgcagtacgagaaacatcccgagtggg gacacttatgtggatggagtagatataggggatatggagtttgtattaagagaccgtaaa caaatttcagaagaaggaatgctcatggcaattatcccaatcaacaaacacgataaaaaa ctactctcagatcccgaatttatttcccgtggattcgtcgatcaaaacttcacagagctt agaaaggaaatgaatcgaatgacaaaagaaaccattaacgaactgcgtgatacagatcga gggtcaaggaatcttataaaaaaacgggtaaaaaggactcttgctaaatatgtaaaacaa catacgaagaaagaacccatgattgttccgatattgatggatatttaa

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