Entry |
|
Symbol |
gyrA
|
Name |
(GenBank) DNA gyrase subunit A
|
KO |
|
Organism |
vim Virgibacillus sp. MSP4-1
|
Brite |
KEGG Orthology (KO) [BR:vim00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:vim03032]
GWK91_13170 (gyrA)
03400 DNA repair and recombination proteins [BR:vim03400]
GWK91_13170 (gyrA)
Enzymes [BR:vim01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GWK91_13170 (gyrA)
DNA replication proteins [BR:vim03032]
Prokaryotic type
DNA Topoisomerases
GWK91_13170 (gyrA)
DNA repair and recombination proteins [BR:vim03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GWK91_13170 (gyrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2709232..2711751
|
AA seq |
839 aa
MVDQDRPQVQEINLNQEMRTSFLDYAMSVIVARALPDVRDGMKPVHRRILYAMHDLGMHA
DKAYKKSARIVGEVIGKYHPHGDSAVYDAMVRMAQDFNYRYPLVDGHGNFGSVDGDSAAA
MRYTEARMSKISMEILRDINKDTIDYIDNYDGTEREPAVLPARFPNLLVNGAAGIAVGMA
TNIPPHQLGEVIDAVLAVSKNPEITISELMENYIYGPDFPTGGQILGRRGIRQAFETGKG
SITVRAKSEITEMNNGKSSIIVTEIPFQVNKAKLIEKIAELVRDKKIDGITDLRDESDRD
GMRIVIEMRRDVNPNVVLNNLYKQTALQTTFGINTLALVDGEPKVLNLKQALTHYLDHQK
VVIKRRTAYELRKAEARAHILQGLRIALDHLDEVISLIRNSKTTDIAREELISRFELSEK
QAQAILDMRLQRLTGLEREKIENEYSDLMKLIGELKEILADEEKVLEIIREELTEIKERF
NDERKTEIMTGGSDFIEDEDLIPEETIVVTLTHKGYIKRLPASTYRTQRRGGRGVQGMGT
NEDDFVEHLLSTSTHDTILFFSNKGKVYKTKGYEIPAFGRTAKGIPLVNVLEVEKGEWIN
AMIAISEFSEDWYLFFTTEQGISKRTTLSQFANIRRGGLRAINLREDDELISVRLTDGNK
QIMIGTRQGYLIRFDEQDVRSMGRTAAGVKGITLRDEEDKVVSMEILDETTQVLTVTNKG
FGKRTKADEYRTTNRGGKGILTCHLTEKNGHVVAVKAVTGDEDLILITESGMLIRMPVES
ISETGRNTQGVKLIRLEEGEEVSTVARIAQEDEEDEQEHEESGEADTDQEPDQDGELTE |
NT seq |
2520 nt +upstreamnt +downstreamnt
atggtggatcaggatcgtccacaggttcaggaaataaatttgaatcaggagatgcgtacg
tcatttttggattacgcaatgagtgttattgttgctcgtgcccttcctgatgttcgcgac
ggaatgaaacccgtacatagaagaatattatatgccatgcatgatttaggtatgcatgca
gacaaagcttataaaaaatccgcccgtattgtcggggaagttatcggtaagtaccatccc
catggggactcggctgtatacgatgcaatggttcgtatggcacaggattttaactatcgt
tatcctctggttgatggacatggaaatttcggttctgttgatggagattcagctgctgcg
atgcgttacacagaagctcgtatgtccaaaatttccatggagattttacgggatatcaat
aaagatacgattgattatattgataactatgatgggacagaaagagaaccggcagtcctg
cctgcccgttttcctaatttactggtgaatggtgcagcaggtattgcagtcggaatggct
actaatattcctccccatcaactgggagaggtaattgatgcggtcttagctgtcagtaaa
aacccggaaatcaccatcagtgaactcatggaaaactatatttatggaccggatttccct
actggtggacagattcttggacgcagaggaatccgtcaggcctttgaaaccggaaaggga
tccattacggtccgtgcaaaatcagaaattacggaaatgaacaatggaaaatcatccatt
attgttaccgagattcccttccaggtaaacaaggcaaaattaattgaaaaaattgctgag
cttgttcgggataagaaaattgatggaattacagaccttcgtgatgaatccgaccgtgat
ggtatgcggattgtgattgaaatgcgcagggatgtgaatcccaatgtcgtcctaaataat
ttatacaagcagacagctcttcaaaccactttcggaatcaatacgctggctctggttgat
ggagagccaaaagttttaaatctaaaacaggccttaacccattacctagatcatcagaaa
gtggtcattaaaagaagaacggcttatgaactgagaaaagctgaagcaagggctcatatt
ctgcagggtctgcgtattgccttagatcaccttgatgaagttatttctcttattcgcaat
tccaaaacgaccgatattgccagagaagagctgatcagccggtttgaattatccgaaaag
caggcacaggcaattttggatatgcgtctccagcgtttgacaggtctggaacgtgaaaag
atagagaatgaatatagtgacttaatgaagctaattggagagttaaaagaaattttggct
gatgaagagaaagtactggaaattattcgagaagaattaaccgagattaaagagcgtttt
aacgatgaaagaaagacagaaattatgacaggtggatccgactttattgaggatgaggat
ctgattcctgaagaaaccattgttgttacgctcacacataaagggtatattaagcgtctt
ccagcttccacctatcgtacacagagacgcggaggacgtggtgttcagggaatgggtacg
aatgaggatgactttgtggagcatcttctatctacgtccacacatgacaccattcttttc
ttctctaataaagggaaagtttataaaacgaagggctatgaaattcctgcctttggacga
acagctaaaggaattccattagttaatgtgctggaagttgaaaaaggtgaatggattaat
gctatgattgccatcagtgagttctctgaggattggtatttattcttcaccactgaacag
ggaatatccaaacgcacgaccctatctcagtttgccaatatccgcagaggcggtctcaga
gctattaatctgagagaagatgatgaactgatttccgtgcgacttaccgatggaaataaa
caaattatgattgggaccagacaggggtacttaatccgttttgatgaacaggatgtacgt
tccatgggacgtacggctgctggtgtaaaaggtattaccttaagagatgaagaagataag
gtggtatccatggaaatcctcgatgaaactactcaggttctgacggttaccaataaaggt
tttgggaagcgaacaaaggctgatgaatatcgaacaacaaaccgtggcggaaaaggaatt
ctgacctgtcatttaacagagaagaacggacatgtagttgcggttaaagctgtgaccggt
gatgaggacctgatattaattacggaaagcggaatgcttatccgaatgcctgtagaaagc
atttccgagacaggtcgtaatactcaaggggttaaactcattcgccttgaagaaggagag
gaagtttcaaccgtagcaaggattgcccaggaagatgaagaagatgaacaggaacatgaa
gaatccggtgaagcagacacggatcaagaacctgatcaggacggggaattaacagaataa |