Virgibacillus sp. MSP4-1: GWK91_14875
Help
Entry
GWK91_14875 CDS
T06398
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
vim
Virgibacillus sp. MSP4-1
Brite
KEGG Orthology (KO) [BR:
vim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vim03021
]
GWK91_14875 (sigB)
Transcription machinery [BR:
vim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWK91_14875 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
KORA
HTH_23
HTH_28
HTH_50
Sigma70_ECF
TnsD
HTH_Tnp_1_2
HTH_Tnp_ISL3
NirdL-like_HTH
HTH_37
HTH_AsnC-type
IF2_N
LexA_DNA_bind
HNF-1_N
TAF
DUF134
DUF2316
GntR
Nup49_C
Motif
Other DBs
NCBI-ProteinID:
QHS24122
UniProt:
A0A6B9YHC9
LinkDB
All DBs
Position
3016042..3016833
Genome browser
AA seq
263 aa
AA seq
DB search
MTAKSQPHSDYDEEVYQWIETLQKNPQNETVHEKLVLEFENLVHSIASKYSKNSSIHEDL
VQVGMLGLMAAIKRYDPSVGKSFEAFAIPTIVGEMKRFIRDKTWSVHVPRRIKELGPKIR
KAAEELTTNLQYSPSVKEIAEHLGVSEEEVLEAMEMSQSYRALSADRKMESDSDGGKVSI
LDLVGAKEDGYNQVDYKMLLEKLMPVLSQRERQIIQFIYFENKSQKETGEHLGISQMHVS
RLQRRALRKLRESLQSDSPEVLF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaaatctcaaccacacagtgattatgatgaagaggtttatcaatggatagaa
acccttcaaaagaatccgcaaaacgaaactgtacatgagaagctggttctggaatttgaa
aatttagttcactccattgccagtaagtattccaagaacagttccatccatgaggacctt
gtacaagttggtatgctgggtttgatggctgccattaaacgttatgatccttctgtagga
aaatcctttgaagcctttgctatccctacaattgtgggtgagatgaaaagatttatccgg
gataaaacatggagtgtacacgtccctagacgaattaaggaacttgggccaaaaataaga
aaagccgccgaggaattgaccacaaatctgcaatattccccatctgtaaaggaaatcgct
gagcatcttggcgtcagtgaagaagaagtgctcgaagcgatggaaatgagccaaagttat
cgggctttatccgctgatcgtaaaatggagtcagattcggacgggggaaaagtttccatt
cttgatttagtaggtgcaaaagaggacggatataaccaggttgattacaaaatgcttctg
gagaaattaatgcctgttttatctcaacgtgaacgtcagattatccagttcatttacttt
gaaaataaaagtcaaaaggaaactggagaacatcttggtatttcacaaatgcatgtttcc
cgactgcaaagacgtgccttaagaaagcttcgagaatccttgcagtcggatagtccggag
gttttattttga
DBGET
integrated database retrieval system
