Vulgatibacter incomptus: AKJ08_0018
Help
Entry
AKJ08_0018 CDS
T04035
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03420
Nucleotide excision repair
vin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKJ08_0018
03430 Mismatch repair
AKJ08_0018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_0018
Enzymes [BR:
vin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AKJ08_0018
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKJ08_0018
MMR (mismatch excision repair)
Other MMR factors
AKJ08_0018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DUF3553
PcrA_UvrD_tudor
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
AKU89631
UniProt:
A0A0K1P867
LinkDB
All DBs
Position
18178..20496
Genome browser
AA seq
772 aa
AA seq
DB search
MAFDPSKLPSLLNPEQLRAATHTGGPLLVLAGAGSGKTRVITYRIANLVIAHGIEPWRIL
AVTFTNKAAGEMKERLEKLLGPTAHEAWISTFHATGARILRRDGAAIGIPSGFVIYDDSD
QLAEMKRVMKSMGVDPKLVDPRKVLHRIDDAKNHGRSPDDLAKRPGYDELSRLTPELYRR
YQKSLAAAGAVDFGDLLSRLVELFEKAPDVLQKYRNRFRHVLVDEFQDTNRVQYRLLQML
AGDGRGLCVVGDDDQAIYRWRGADVTNLLSFPQDFAGAEVVKLEQNYRSTQTILDAAHAV
IAHNPTRMDKRLWTEESGGAPLELVVARDERDEAQQVADRVRAALRDGVDAAEVAVFYRT
NAQSRVIEEAFRLGRIPYAVVRGRSFYDRAEVKDLASYLRLAVNPLSSADALRVINKPAR
GIGDTTVGRIEAAAEEWGVGIVDACRQSAQIPGLNASAQGKARSFAQLVGKLALEAANGS
AGAAAEAALKLSGLEDAYLAEGSDEAVDRLDNLRELVGAAKEWDQTWTPPIDPDEPEAEG
PTPLAAFLEQLALLGDADEKIAGPKVALMTLHASKGLEFERVFLTGMEETVFPHSRALGD
EGGIEEVAEERRLCYVGFTRAKRRLVLSLARSRVLFGNLRFNEASRFLGEVPRELFGIKG
AAKPSRQTGVHVVYDDARGEPEIDLGDDDGFEDRYQVDYSFDQRPAPRQPEIRRAVVRAP
APDTGAPFRIGMPARHPSFGVGMVEGIDGDKVAVRFPGVGVKRVVARFLQAV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgatccctccaagcttccgtcgctgctgaaccctgagcagctccgcgccgcc
acgcacactggcggcccgctcctcgtgctggcaggcgcaggttcgggcaagacccgcgtg
atcacctaccggatcgcgaacctcgtgatcgcccacggcatcgagccgtggcggatcctg
gcggtgaccttcaccaacaaggccgccggcgagatgaaggagcgcctcgagaagctcctg
gggcccacggcacacgaggcctggatctcgaccttccacgccaccggcgcgcggatcctg
cgccgggacggcgcggccatcgggatccccagcggcttcgtgatctacgacgactccgat
cagctcgccgagatgaagcgggtgatgaagtcgatgggcgtggatccgaagctcgtggat
ccgcgcaaggtgctccaccggatcgacgacgcgaagaaccacggccgctcgccggacgac
ctcgcgaagcggccgggctacgacgagctctcgcgcctgacgcccgagctctaccgccgc
taccagaagtccctcgccgccgccggcgccgtggacttcggcgacctgctatcgcggctc
gtggagctcttcgagaaggcgccggacgtcctgcagaagtaccggaaccgcttccggcac
gtgctggtggacgagttccaggacaccaaccgcgtgcagtatcgcctgctgcagatgctg
gcgggcgacgggcgcggcctctgcgtggtgggcgacgacgaccaggcgatctaccgctgg
cgcggcgcggacgtcacgaacctgctctccttcccccaggacttcgccggggccgaggtg
gtgaagctcgagcagaactaccgctcgacccagacgatcctcgacgccgcccacgcggtg
atcgcccacaacccgacgcggatggacaagcgcctctggacggaggagagcggcggcgcg
cccctcgagctcgtggtcgcccgggacgagagggacgaggcgcagcaggtggccgaccgg
gtgcgcgcggcgctgcgcgacggcgtcgacgccgccgaggtcgcggtcttctaccggacc
aacgcccagagccgcgtgatcgaggaggccttccgcctcggccggatcccgtacgcggtg
gttcggggacgatccttctacgaccgcgccgaggtgaaggacctcgcctcctacctgcgg
ctcgcggtgaaccccctctcgagcgcggacgcccttcgcgtgatcaacaagccggcccgg
ggcatcggcgacaccaccgtgggccggatcgaggcggcggcggaggagtggggcgtcggg
atcgtggacgcgtgccggcagtcggcgcagatccccgggctgaacgcctcggcgcagggc
aaggcccgctcgttcgcgcagctcgtgggcaagctcgccctcgaggcggccaacggatcc
gccggtgcagctgccgaggcggccctgaagctctccggcctcgaggatgcgtacctggcc
gaggggagcgacgaggccgtcgatcgcctggacaacctccgcgagctcgtgggcgcggcc
aaggagtgggaccagacctggacgccgccgatcgacccggacgaacccgaggccgagggg
ccgacgccgctcgccgccttcctggagcagctcgccctcctgggcgacgccgacgagaag
atcgccggcccgaaggtggcgctgatgacgctccacgcgtcaaagggcctggagttcgag
cgggtcttcctcaccggaatggaggagaccgtcttcccccactcgcgggcgctgggcgac
gagggcggcatcgaggaggtcgccgaggagcggcgcctctgctacgtcggcttcacacgg
gccaagcgccgcctggtgctctcgctggcccgcagccgcgtgctcttcggcaacctgcgc
ttcaacgaggcctcgcgcttcctgggcgaggtgccgagggagctcttcggcatcaagggg
gcggccaagccttcgcggcagacgggggtccacgtcgtctacgacgacgctcggggcgag
cccgagatcgacctcggcgacgacgacggcttcgaagaccgctaccaggtcgactactcc
ttcgatcagcggcctgcccctcggcagcccgagatccgcagggcggtcgtccgggctccc
gctcccgacacaggcgccccgttccggatcgggatgccggcccgtcatcccagcttcggc
gtcggcatggtggaggggatcgacggcgacaaggtcgccgtgcggttcccgggggtcggg
gtgaagcgggtcgtggcccgcttcctccaggcggtgtga
DBGET
integrated database retrieval system
