Vulgatibacter incomptus: AKJ08_0087
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Entry
AKJ08_0087 CDS
T04035
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AKJ08_0087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_0087
Enzymes [BR:
vin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AKJ08_0087
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AKJ08_0087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
AKU89700
UniProt:
A0A0K1P849
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All DBs
Position
130354..133935
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AA seq
1193 aa
AA seq
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MIHLTYSNRTEALLDALAADLAVEGAAGRSPFEPTRLIVPNRNVEVWLKHGLARRMGIAA
NLDVQLLRRFVGGLLPEGMRLVDGPLLFDLVLSLLLDDDYLAHSALARPRSYLLAAGDGA
DAVDLRRFQLASQLARLFDEYGHARPEMLAAWSREPLLAGTPFAETEEWQRRIWLDLFAP
DGLAERWGREQGIRYVQLQDLATAEGLSSPEKAPVHVFGVSYVASVFHRILARLASGSDL
RVYSLNPCMEFWEDVEAAPEIRRRLARHGRLGGEGTLFREPDPFGLEAGGDTPALSLWGR
PGRENIRLLNELAECDYRAVFEDPDGARSLLRQLQHDILVREPERTEPDPAFDFSADKSV
RILACPGIKREAEAIAEAIWSLVAEDDGRGSGGEPLRFNDIAVLVAGSDPSAYFTHLCAA
FEETWKIPYSLSDSAFAAESRIAEAAELLLALPAGRFTRAEVLAFVTHPAVMSRFPGVDA
SAWGRWCDRLGIVRGADRFDLRESYVEQDLLSWDQGLRRLALGAFLADADQPFEAVDEDV
VRRYLPAEAGGEGEEGFGLFARSLIADLRAAKDARLTMSEWAGFLGDLVQAYLTPSGEAE
ARELERCLRTIRGIADTRLDDRPASFRIASELARQALGGLGGSRGQYLAGGVVVSTLQPM
RAIPFRAVFIAGLGEGRFPAADRRNHLDLRLARPRAGDVSPREGDQYMFLEAILCARERL
QLSFVARDQLTGDPLQPSIVVAELERMLARGYGATKLREELPLRRFEAPEAFASPQARRE
AQALALREELRRHLASGHGDGDRAASAPEFSERGQRATSAESRVPELDGLLDAVKPELRL
RLAEAHGLHAHRLDRVTPLHDPSEALRLTLRDLRRFLECPLQGSAALLLGLRDDEEDGLL
TLEDEALESSALDRSVFLADRFVAGVAGAGSGSPDFEASFDERAELERLAGRFPLGLFGE
AERARQLGTLAEWGGTYQEIAAARGPGVEILRFGPAIEEDRGATPCDPVRIESVGGCVAH
VEVRGRTGVLVAGRKGSLILKTPKVSDAVSRQKDALRAFVDRVILAAAGLADEKATHSAW
FCRTADGKELEPIVFAPISRGEALEWLGTMAEDLVSRAHDYFLPCEAVFRSRAKPGMPLA
EHVAKVADDRRKRPFDHGPVRGAEGFPPPPEDEALWMIERRFGLFFAKVGVVE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgattcacctcacctattcaaaccggacggaggcgctccttgacgcgctggcggccgat
cttgccgtggagggggcggcggggcggagcccgttcgagcccacccggctgatcgtgccg
aatcgcaacgtcgaggtctggctgaagcacggcctggcccgccgcatggggatcgccgcg
aaccttgacgtccagctccttcggcgcttcgtcggcggcctcctgccggaggggatgcgc
ctggtggacgggccgctcctcttcgacctggtcctctcgctcctcctggacgacgactac
ctggcgcactcggccctggcgcggccgcgctcgtacctgctggctgcaggggatggggcg
gacgccgtggacctccggcgcttccagctcgccagccagctcgcgcgcctcttcgacgaa
tacggccacgcgcggccggagatgctcgcggcctggtcccgggagcccttgctcgcaggg
acgcccttcgccgagaccgaggaatggcagcggcggatctggctggacctcttcgccccc
gacgggctcgccgagaggtggggcagggagcaggggatccggtacgtccaactccaggac
ctcgcaaccgcggagggcctgagcagtccggagaaggcgccggtccatgtcttcggcgtc
tcgtacgtggcctcggtcttccatcggatcctggcgcgcctggcgtcggggagcgacctt
cgcgtctactcgctgaacccctgcatggagttctgggaggacgtggaggcggcccccgag
atccgccggaggctggcgcggcacgggcggctgggaggggaggggaccctcttccgggag
ccggatcccttcgggctcgaggcaggcggcgacacgccggcgctctcgctgtgggggagg
ccggggcgcgagaacatccgcttgttgaacgagctcgccgaatgcgattaccgcgcggtc
ttcgaggatcccgacggggctcgaagcctgctgcgccagctccagcacgacatcctggtg
cgggagccggagcggacggagcccgatcccgccttcgacttcagcgcggacaagagcgtg
cggatcctggcctgccccggcatcaagcgggaagcggaggccatcgccgaggcgatctgg
tccctcgtggcggaggacgacggaaggggatccggcggggagccgctccgcttcaacgac
atcgctgtcctcgtggcggggagcgatccgagcgcgtacttcacccacctctgcgcggcg
ttcgaagagacctggaagatcccctacagcctctcggattcggccttcgccgcggagagc
cggatcgccgaggcggcggagctcctcctggcgctgccggcggggcggttcacgcgggcg
gaggtgctcgccttcgtcacccaccctgcggtgatgtcgcgcttccctggtgtcgatgcg
tcggcgtgggggcgatggtgcgatcggctgggtatcgtccgcggcgcggatcgcttcgac
ctgcgcgagagctatgtcgagcaggatctgctctcgtgggatcaggggctgcggcggctc
gcgctcggcgccttcctcgccgacgcggaccagccgttcgaggccgtcgatgaggacgtc
gtccggcgctatctcccggccgaggcgggcggcgagggggaagagggcttcgggctcttc
gcccgatcgctgatcgccgaccttcgggccgcgaaggacgccaggctcacgatgtcggag
tgggccgggttcctcggcgatctcgtgcaagcgtatttgacgccgagtggagaagccgag
gcgcgcgagctcgagcgatgccttcgcacgatccgcggcatcgcggacacccggctcgac
gaccgacccgcctcgttccggatcgcatccgagctcgcccggcaggcgctcgggggcctt
gggggatcgcgggggcagtacctcgccggcggtgtggtcgtctccacgctccagccgatg
cgggcgatccccttccgcgccgtcttcatcgccggtctgggggaggggcggttccctgcg
gccgatcggcggaaccacctcgatctgcgcctcgcgcggccccgggcaggggacgtctcc
ccgcgggagggcgatcagtacatgttcctcgaagcgatcctctgtgcgcgcgagcggctc
cagctctcgttcgtcgcgcgggatcagctcacgggtgatccgctccagccctcgatcgtg
gtcgccgagctcgaacggatgctcgccaggggctacggcgcgacgaagctgcgagaggaa
ctgccgcttcggcgcttcgaggcgcccgaggcgttcgcgtcgccgcaggccaggcgggag
gcgcaggctctcgcgctccgggaggagctgcggcgccacctggcgtccgggcacggggac
ggggatcgggctgcgagtgcgccggagttttcagagcgggggcagagagcgacgagcgcc
gagtcccgggttccggagttggatggccttctcgatgcggtgaagccggagctgcgtctc
cgtctcgccgaggcccacgggctccacgcccatcgcctggatcgtgtcacgccattgcac
gacccttcggaggcgctgcggctcacgctgcgcgatctgcggcgatttctcgagtgcccc
ctgcagggcagcgcggcgctcctgctcggcctccgcgacgacgaggaagacggcctcctc
acgctcgaggacgaggcgctggagagcagcgccctcgaccgatcggtgttcctcgcggat
cgattcgtcgccggtgtagccggcgcggggagcggatcgcccgacttcgaggccagcttc
gacgagcgcgctgagttggagaggctcgccggccggtttcccctgggactgttcggcgag
gcggagcgggctcgccagctcggcaccctcgccgaatggggagggacgtaccaggagatt
gctgcggccagaggtccgggcgtcgagatccttcgctttgggccggccatcgaagaggat
cggggcgccacgccctgtgatccggtgcggatcgagagcgtcggcggttgcgtcgcgcac
gtggaggtccgcggacggaccggggtgttggtggcgggccgcaagggctcgctgatcctc
aagacgcccaaggtgtcggacgcggtctcgaggcagaaggacgcgctgcgggccttcgtc
gatcgggtgatcctcgcggcggcgggtctggcagacgaaaaggcgacccactccgcctgg
ttctgccggacggcggacggtaaggagctcgagccgatcgtcttcgcgccgatctcgaga
ggcgaggcgctcgagtggctggggacgatggcagaggacctcgtctcgcgggcccacgac
tacttcctgccgtgcgaggcggtgttccgctctcgcgcgaagccagggatgccgcttgcg
gagcacgtggcgaaggtcgccgacgatcggcgaaagcggcccttcgatcatgggccggtg
cgcggcgccgagggatttccgccgccgccggaggacgaggcgctctggatgatcgagagg
cgcttcggcctcttcttcgccaaggtcggggtggtcgaatga
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