Vulgatibacter incomptus: AKJ08_0089
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Entry
AKJ08_0089 CDS
T04035
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vin
Vulgatibacter incomptus
Pathway
vin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AKJ08_0089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vin03400
]
AKJ08_0089
Enzymes [BR:
vin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AKJ08_0089
DNA repair and recombination proteins [BR:
vin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AKJ08_0089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
AAA_22
AAA_16
SLFN-g3_helicase
NTPase_1
nSTAND3
AAA_28
AAA
T2SSE
DEAD
AAA_7
DUF1707
Motif
Other DBs
NCBI-ProteinID:
AKU89702
UniProt:
A0A0K1P883
LinkDB
All DBs
Position
137533..139536
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AA seq
667 aa
AA seq
DB search
MNDEIRLSPLGAARPRLLRGLLRGMGRGARGEAAPEVPSELEEAVARCELEGRTLHQAWE
LVRCGQGLSAVERRGLFFLAVAALVSQGRGSTRLPTSDGSLDRLLGDLRATAADRAQVVA
LLAEARGQGPRLRAIFGVPGDYKPLLLGDDHLCLQRMFHFEERLVASLRDRMSIPPLEPA
SPDALRDVLDRAPTISGKKAALSDEQQEAVLAALRLPLAVITGGPGTGKTSIVVSILRML
ARQGVAPERIALAAPTGKAAFRMAESIRKYLLALADPAAADLALIASCPEPRTLHRLLGY
SPVRESFLHHENNPLAEEVVIVDEASMIDLVLMDRLVRSIRPGARLVLLGDSEQLPSVDA
GAVLRDLVPPPGVTDSRSRFSVRLTRSYRMDPSDPSGRNVLSVARAINEGRAPFDGEEPV
RLRQSAEELAFEKVELLQGDLGPFLRRWHDEKIRGLPSFAERVKREWRWEDGRFVAGDEE
ELRILFRHFESLRLLCVTRETPRTGTEAVNAELHALVAGRSSSREAAFLPGEPVMMQRND
YERGLFNGDQGLVLRVREAGAAGHHFRAVFPKGEGFAVFHLDGLRAHLRLSYAMTVHKSQ
GSEFDVLGLILPENPMPLLTREILYTAVTRSRRGVAIVGSREVLEKGAAARLERHSGVAQ
KLRSLEG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgagatccgactctcgccgctgggcgcggcgcggcctcggctcttgcggggg
ctcctgcggggcatgggtcgaggcgcgcgtggcgaggccgcacccgaggttccctcggag
ctcgaggaggcggtggctcgctgcgagctcgaggggcggacgctgcaccaggcatgggag
ctggtgcgctgtggtcaggggctgtcggcggtcgagcggcgggggctcttctttctggca
gtcgcagcgctggtgagccagggccgtggcagcacgcgcctgcccacctccgacggctcg
ttggatcggctcctcggcgatctgcgggccaccgctgccgatcgggcgcaggtcgtcgcg
ctcctcgcggaagcgcgtggacaggggccgcggctgagggcgatcttcggtgtcccgggc
gactacaagccgctcctcctgggcgacgatcacctctgcctgcagcggatgttccacttc
gaggagcgtctggttgcctcactgcgggatcgcatgtcgattcccccgctggagcccgcg
tcgcccgacgcgctccgcgacgtgctcgaccgtgccccgacgatctcgggcaagaaggcc
gccctatccgacgagcagcaggaggcggtgctcgcggcgctgcggctgccgctcgccgtg
atcaccggcggccccggcacgggcaagacgtcgatcgtggtttcgatcctgcggatgctc
gcccggcagggagtggcgccggagcggatcgcgctcgcggcgcccaccggcaaggcggcg
ttccgcatggccgagtcgattcgcaagtatctgctggcgctcgcggaccctgccgcggcg
gacctcgcgctcatcgcatcttgtccggagccgcgcacgctccaccgcctcctgggctac
tcgccggtccgcgagagcttcctgcaccacgagaacaatccgttagccgaggaggtcgtg
atcgtcgacgaggcttcgatgatcgacctcgtcctgatggaccgcctcgtgcgatcgatc
cggccgggcgcgcgcctcgtcctcctgggcgactcggagcagctcccgtcggtggacgca
ggggcggtgctgagggatctggtgcctccgcccggcgtcaccgactcgcgctcgaggttc
tccgtgaggctcacccggagctaccgcatggaccccagtgatccgtcggggcgcaacgtg
ctctcggtggcccgggcgatcaacgagggcagggcgccgttcgacggcgaggagccggtc
cgacttcggcaatcggcggaggagctcgccttcgagaaggtggagctccttcagggcgac
ctgggcccgttccttcggcgatggcacgacgagaagattcggggcctcccgtcgttcgcg
gagcgggtgaaacgggagtggcgctgggaggacgggcgcttcgtggccggggacgaggag
gagctacggatcctcttccgccacttcgagagcctgcgcctcctctgcgtgacccgggaa
acgccacggaccggcacggaggcggtgaacgccgagctccatgcgctcgtggcgggccgg
tcgtcgtcgcgggaggcggcgttcctgcccggggagccggtgatgatgcagcgcaacgac
tacgagcgcggcctcttcaacggcgatcagggcctggtcctccgggtccgggaggctggc
gctgccgggcatcacttccgcgccgtcttcccgaagggagagggcttcgccgtcttccat
ctcgacggccttcgagcgcatctgcggctctcgtacgccatgacggtgcacaagtcgcag
ggctccgagttcgacgtgttggggctgatcctcccggagaacccgatgccgctcctcacc
cgcgagatcctctacaccgcggtcacccgaagccgccggggcgtggccatcgtcggctcc
cgcgaagtgctcgagaagggcgctgccgcgcgcctcgagcgccacagcggtgtggcgcag
aagctgcgttcgctcgagggctga
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